FastQCFastQC Report
Fri 15 Mar 2019
HGTYHAFXY_n01_r4zt2s53.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGTYHAFXY_n01_r4zt2s53.fastq.gz
File typeConventional base calls
EncodingIllumina 1.3
Total Sequences4
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGATAACATACTATTCCACAAAACAGTAATAGCTAACAGCTCCATAAT125.0No Hit
CCAATCAGCCTGCATTTGTGAGAAGAGCGTTTCGCCCAGCACGTGGATTT125.0No Hit
ATTCAATCTATGCAGAGTTGATAAGGACTTGTATCCATTGGGGTGTTTGA125.0No Hit
CTCTTGCCCTCTCGTGGCTTAGTACTTTGTAAGCCCTGAGAGAACCTGGG125.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)