Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HGTNGBGXJ_n01_AtSPL16_ampCol-B_s HGTNGBGXJ_n01_AtSPL16_ampCol-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 83435.0 0.0 76.0 35.0 95.80991190747288 76.0 pass pass pass pass pass pass pass pass pass warn pass HGTNGBGXJ_n01_AtTGA5_3351.27-B_s HGTNGBGXJ_n01_AtTGA5_3351.27-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 12374861.0 0.0 76.0 38.0 57.75970849305547 76.0 pass pass pass pass fail pass pass pass warn warn fail HGTNGBGXJ_n01_AtTGA5_Col-B_training_s HGTNGBGXJ_n01_AtTGA5_Col-B_training_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 3293887.0 0.0 76.0 38.0 63.060950485300715 76.0 pass pass pass pass fail pass pass pass warn pass warn HGTNGBGXJ_n01_AtTGA5_Md-B_s HGTNGBGXJ_n01_AtTGA5_Md-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 14620229.0 0.0 76.0 38.0 54.14538064610509 76.0 pass pass pass pass fail fail pass pass warn warn fail HGTNGBGXJ_n01_AtXBAT33_Col-B_s HGTNGBGXJ_n01_AtXBAT33_Col-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 467671.0 0.0 76.0 34.0 92.82535841699699 76.0 pass pass pass pass fail pass pass pass pass warn fail HGTNGBGXJ_n01_Halo_3351.27-B_s HGTNGBGXJ_n01_Halo_3351.27-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 2057524.0 0.0 76.0 39.0 78.18027742391514 76.0 pass pass pass pass fail fail pass pass pass warn fail HGTNGBGXJ_n01_Halo_Col-B_training_s HGTNGBGXJ_n01_Halo_Col-B_training_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 1094776.0 0.0 76.0 37.0 76.5356957470399 76.0 pass pass pass pass fail pass pass pass pass pass fail HGTNGBGXJ_n01_Halo_Md-B_s HGTNGBGXJ_n01_Halo_Md-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 373160.0 0.0 76.0 37.0 70.65688631916261 76.0 pass pass pass pass fail fail pass pass pass fail fail HGTNGBGXJ_n01_Halo_ampCol-B_s HGTNGBGXJ_n01_Halo_ampCol-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 131905.0 0.0 76.0 39.0 90.54786944618728 76.0 pass pass pass pass fail warn pass pass pass fail fail HGTNGBGXJ_n01_Halo_ampPN94-B_s HGTNGBGXJ_n01_Halo_ampPN94-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 862186.0 0.0 76.0 38.0 89.40414175238249 76.0 pass pass pass pass fail warn pass pass pass warn fail HGTNGBGXJ_n01_MdPS82_Md-B_s1 HGTNGBGXJ_n01_MdPS82_Md-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 441641.0 0.0 76.0 33.0 91.31790961145448 76.0 pass pass pass pass fail warn pass pass pass warn fail HGTNGBGXJ_n01_MdPS82_Md-B_s2 HGTNGBGXJ_n01_MdPS82_Md-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 345457.0 0.0 76.0 33.0 93.13294176277881 76.0 pass pass pass pass fail pass pass pass pass warn fail HGTNGBGXJ_n01_MdPS90_Md-B_s1 HGTNGBGXJ_n01_MdPS90_Md-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 206184.0 0.0 76.0 33.0 92.65644317906144 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_MdPS90_Md-B_s2 HGTNGBGXJ_n01_MdPS90_Md-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 195360.0 0.0 76.0 33.0 87.8827460979092 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_MdPS98_Md-B_s1 HGTNGBGXJ_n01_MdPS98_Md-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 281178.0 0.0 76.0 33.0 92.34851420007216 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_MdPS98_Md-B_s2 HGTNGBGXJ_n01_MdPS98_Md-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 166332.0 0.0 76.0 32.0 90.8666278755642 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvFemaleYABBY3_3351.27-B_s1 HGTNGBGXJ_n01_VvFemaleYABBY3_3351.27-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 181340.0 0.0 76.0 32.0 91.90951671060796 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvFemaleYABBY3_3351.27-B_s2 HGTNGBGXJ_n01_VvFemaleYABBY3_3351.27-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 332571.0 0.0 76.0 30.0 94.53598845901297 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvHYH_ampPN94-B_s1 HGTNGBGXJ_n01_VvHYH_ampPN94-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 251048.0 0.0 76.0 33.0 93.63015620130025 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvHYH_ampPN94-B_s2 HGTNGBGXJ_n01_VvHYH_ampPN94-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 226519.0 0.0 76.0 33.0 94.27382457504908 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvMYB135_PN94-B_s1 HGTNGBGXJ_n01_VvMYB135_PN94-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 407829.0 0.0 76.0 33.0 92.81867728614165 76.0 pass pass pass pass fail pass pass pass pass warn fail HGTNGBGXJ_n01_VvMYB135_PN94-B_s2 HGTNGBGXJ_n01_VvMYB135_PN94-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 362400.0 0.0 76.0 33.0 93.476036063007 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvMYB137_PN94-B_s1 HGTNGBGXJ_n01_VvMYB137_PN94-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 423968.0 0.0 76.0 33.0 91.68451751171229 76.0 pass pass pass pass fail pass pass pass pass warn fail HGTNGBGXJ_n01_VvMYB137_PN94-B_s2 HGTNGBGXJ_n01_VvMYB137_PN94-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 445413.0 0.0 76.0 33.0 92.32786111370372 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvMYB175_PN94-B_s1 HGTNGBGXJ_n01_VvMYB175_PN94-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 513669.0 0.0 76.0 32.0 86.31763236831324 76.0 pass pass pass pass fail pass pass pass pass warn pass HGTNGBGXJ_n01_VvMYB175_PN94-B_s2 HGTNGBGXJ_n01_VvMYB175_PN94-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 253027.0 0.0 76.0 32.0 88.85296452145587 76.0 pass pass pass pass fail pass pass pass pass warn pass HGTNGBGXJ_n01_VvMYBA1_PN94-B_s1 HGTNGBGXJ_n01_VvMYBA1_PN94-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 228788.0 0.0 76.0 32.0 94.84760329329414 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvMYBA1_PN94-B_s2 HGTNGBGXJ_n01_VvMYBA1_PN94-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 332410.0 0.0 76.0 32.0 93.01366809477403 76.0 pass pass pass pass fail pass pass pass pass warn fail HGTNGBGXJ_n01_VvMYBPA1_PN94-B_s1 HGTNGBGXJ_n01_VvMYBPA1_PN94-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 286101.0 0.0 76.0 32.0 95.55147191074053 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_VvMYBPA1_PN94-B_s2 HGTNGBGXJ_n01_VvMYBPA1_PN94-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 315751.0 0.0 76.0 32.0 95.36529306318282 76.0 pass pass pass pass fail warn pass pass pass warn warn HGTNGBGXJ_n01_VvMaleYABBY3_3351.27-B_s1 HGTNGBGXJ_n01_VvMaleYABBY3_3351.27-B_s1.fastq.gz Conventional base calls Sanger / Illumina 1.9 442398.0 0.0 76.0 31.0 94.3330045935277 76.0 pass pass pass pass fail warn pass pass pass warn fail HGTNGBGXJ_n01_VvMaleYABBY3_3351.27-B_s2 HGTNGBGXJ_n01_VvMaleYABBY3_3351.27-B_s2.fastq.gz Conventional base calls Sanger / Illumina 1.9 237178.0 0.0 76.0 30.0 95.38914868104699 76.0 pass pass pass pass fail pass pass pass pass warn warn HGTNGBGXJ_n01_ps-C24SPL9..ph-COLSPL9_Col..s-B..s-B_s HGTNGBGXJ_n01_ps-C24SPL9..ph-COLSPL9_Col..s-B..s-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 49724.0 0.0 76.0 34.0 95.46496661571877 76.0 pass pass warn pass fail pass pass pass pass warn pass HGTNGBGXJ_n01_ps-COLSPL9..ph-C24SPL9_Col..s-B..s-B_s HGTNGBGXJ_n01_ps-COLSPL9..ph-C24SPL9_Col..s-B..s-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 103676.0 0.0 76.0 35.0 82.7693969674756 76.0 pass pass pass pass fail pass pass pass pass warn pass HGTNGBGXJ_n01_ps-bZIP1..ph-bZIP11_Col..s-B..h-B_s HGTNGBGXJ_n01_ps-bZIP1..ph-bZIP11_Col..s-B..h-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 654566.0 0.0 76.0 45.0 80.63273939642195 76.0 pass pass pass pass fail fail pass pass pass fail fail HGTNGBGXJ_n01_ps-bZIP11..ph-bZIP1_Col..s-B..h-B_s HGTNGBGXJ_n01_ps-bZIP11..ph-bZIP1_Col..s-B..h-B_s.fastq.gz Conventional base calls Sanger / Illumina 1.9 62589.0 0.0 76.0 34.0 95.380977488057 76.0 pass pass pass pass fail pass pass pass pass warn pass HGTNGBGXJ_n01_undetermined HGTNGBGXJ_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 73461078.0 0.0 76.0 44.0 2.6694698002129353 76.0 pass pass pass pass pass warn pass pass fail pass pass