FastQCFastQC Report
Thu 13 Sep 2018
HGTFWBGX7_n01_EREB126_BECRAFT9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGTFWBGX7_n01_EREB126_BECRAFT9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1988798
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG2456.6211214E-1018.5714648
CCGTCTT2104.2778993E-818.33290552
GCCGTCT2151.0986369E-616.27868851
CTCCGGA3704.3655746E-1115.13516233
CCGGAGA3553.783498E-1014.78801535
ACTCCGG3806.730261E-1114.73686932
TCCGGAG3604.674803E-1014.58262634
ATGCCGT2454.2734573E-614.28573949
CTCGTAT3701.0695658E-813.243644
TGCCGTC2751.4082101E-512.72729650
CGGAGAA4255.5824785E-912.35234236
CACTCCG4357.872586E-912.06959331
CGTATGC2952.8928125E-511.86472646
AATCTCG4451.1035809E-811.79777541
TCTCGTA4602.2056702E-710.65219343
TCCAGTC6352.0801963E-89.371037525
ATCTCGT6059.901669E-89.25621542
TCACTCC6603.900459E-89.01562130
ACTCCAG7151.517401E-88.8118723
GAGAATC6402.3468965E-78.74957638
Produced by FastQC (version 0.11.5)