[2023-07-01 02:42:44,203] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2023-07-01 02:42:44,203] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2023-07-01 02:42:44,203] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml
[2023-07-01 02:42:44,206] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml
[2023-07-01 02:42:44,206] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}}
[2023-07-01 02:42:44,206] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HGNH2AFX5/merged
[2023-07-01 02:42:44,596] multiqc [WARNING] MultiQC Version v1.14 now available!
[2023-07-01 02:42:44,597] multiqc [INFO ] This is MultiQC v1.9
[2023-07-01 02:42:44,597] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HGNH2AFX5/merged
[2023-07-01 02:42:44,597] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HGNH2AFX5/merged
[2023-07-01 02:42:44,597] multiqc [INFO ] Template : default
[2023-07-01 02:42:44,597] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode]
[2023-07-01 02:42:44,597] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HGNH2AFX5/merged
[2023-07-01 02:42:44,597] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2023-07-01 02:42:44,597] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-35089197/tmp9_0xkmrl
[2023-07-01 02:42:44,698] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-3_fastqc.html
[2023-07-01 02:42:44,701] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-3_fastqc.html
[2023-07-01 02:42:44,743] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-07-01 02:42:44,745] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-07-01 02:42:44,986] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-4_fastqc.html
[2023-07-01 02:42:44,988] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-4_fastqc.html
[2023-07-01 02:42:45,032] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-1_fastqc.html
[2023-07-01 02:42:45,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-1_fastqc.html
[2023-07-01 02:42:45,074] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-7_fastqc.html
[2023-07-01 02:42:45,076] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-7_fastqc.html
[2023-07-01 02:42:45,116] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-6_fastqc.html
[2023-07-01 02:42:45,117] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-6_fastqc.html
[2023-07-01 02:42:45,159] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-11_fastqc.html
[2023-07-01 02:42:45,161] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-11_fastqc.html
[2023-07-01 02:42:45,202] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-9_fastqc.html
[2023-07-01 02:42:45,204] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-9_fastqc.html
[2023-07-01 02:42:45,244] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-2_fastqc.html
[2023-07-01 02:42:45,245] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-2_fastqc.html
[2023-07-01 02:42:45,289] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-11_fastqc.html
[2023-07-01 02:42:45,290] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-11_fastqc.html
[2023-07-01 02:42:45,330] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-8_fastqc.html
[2023-07-01 02:42:45,331] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-8_fastqc.html
[2023-07-01 02:42:45,370] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-10_fastqc.html
[2023-07-01 02:42:45,372] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-10_fastqc.html
[2023-07-01 02:42:45,412] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_undetermined_fastqc.html
[2023-07-01 02:42:45,414] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_undetermined_fastqc.html
[2023-07-01 02:42:45,453] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-9_fastqc.html
[2023-07-01 02:42:45,455] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-9_fastqc.html
[2023-07-01 02:42:45,493] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-3_fastqc.html
[2023-07-01 02:42:45,495] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-3_fastqc.html
[2023-07-01 02:42:45,537] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-8_fastqc.html
[2023-07-01 02:42:45,539] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-8_fastqc.html
[2023-07-01 02:42:45,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-7_fastqc.html
[2023-07-01 02:42:45,581] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-7_fastqc.html
[2023-07-01 02:42:45,622] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-10_fastqc.html
[2023-07-01 02:42:45,623] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-10_fastqc.html
[2023-07-01 02:42:45,665] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-5_fastqc.html
[2023-07-01 02:42:45,667] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-5_fastqc.html
[2023-07-01 02:42:45,708] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-12_fastqc.html
[2023-07-01 02:42:45,710] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-12_fastqc.html
[2023-07-01 02:42:45,750] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-1_fastqc.html
[2023-07-01 02:42:45,751] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-1_fastqc.html
[2023-07-01 02:42:45,791] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-12_fastqc.html
[2023-07-01 02:42:45,792] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_as6-12_fastqc.html
[2023-07-01 02:42:45,835] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n02_undetermined_fastqc.html
[2023-07-01 02:42:45,836] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n02_undetermined_fastqc.html
[2023-07-01 02:42:45,877] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-6_fastqc.html
[2023-07-01 02:42:45,879] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-6_fastqc.html
[2023-07-01 02:42:45,918] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-4_fastqc.html
[2023-07-01 02:42:45,920] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-4_fastqc.html
[2023-07-01 02:42:45,963] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-2_fastqc.html
[2023-07-01 02:42:45,965] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-2_fastqc.html
[2023-07-01 02:42:46,006] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-5_fastqc.html
[2023-07-01 02:42:46,008] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HGNH2AFX5_n01_as6-5_fastqc.html
[2023-07-01 02:42:46,319] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2
[2023-07-01 02:42:46,320] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2
[2023-07-01 02:42:46,328] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table)
[2023-07-01 02:42:46,334] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 13 samples (table)
[2023-07-01 02:42:46,344] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table)
[2023-07-01 02:42:46,348] multiqc [DEBUG ] No samples found: conpair
[2023-07-01 02:42:46,353] multiqc [DEBUG ] No samples found: peddy
[2023-07-01 02:42:46,357] multiqc [DEBUG ] No samples found: somalier
[2023-07-01 02:42:46,362] multiqc [DEBUG ] No samples found: methylQA
[2023-07-01 02:42:46,368] multiqc [DEBUG ] No samples found: mosdepth
[2023-07-01 02:42:46,373] multiqc [DEBUG ] No samples found: phantompeakqualtools
[2023-07-01 02:42:46,376] multiqc [DEBUG ] No samples found: qualimap
[2023-07-01 02:42:46,380] multiqc [DEBUG ] No samples found: preseq
[2023-07-01 02:42:46,384] multiqc [DEBUG ] No samples found: quast
[2023-07-01 02:42:46,388] multiqc [DEBUG ] No samples found: qorts
[2023-07-01 02:42:46,393] multiqc [DEBUG ] No samples found: rna_seqc
[2023-07-01 02:42:46,397] multiqc [DEBUG ] No samples found: rockhopper
[2023-07-01 02:42:46,401] multiqc [DEBUG ] No samples found: rsem
[2023-07-01 02:42:46,410] multiqc [DEBUG ] No samples found: rseqc
[2023-07-01 02:42:46,415] multiqc [DEBUG ] No samples found: busco
[2023-07-01 02:42:46,419] multiqc [DEBUG ] No samples found: goleft_indexcov
[2023-07-01 02:42:46,423] multiqc [DEBUG ] No samples found: disambiguate
[2023-07-01 02:42:46,428] multiqc [DEBUG ] No samples found: supernova
[2023-07-01 02:42:46,438] multiqc [DEBUG ] No samples found: deeptools
[2023-07-01 02:42:46,442] multiqc [DEBUG ] No samples found: sargasso
[2023-07-01 02:42:46,446] multiqc [DEBUG ] No samples found: verifybamid
[2023-07-01 02:42:46,452] multiqc [DEBUG ] No samples found: mirtrace
[2023-07-01 02:42:46,456] multiqc [DEBUG ] No samples found: happy
[2023-07-01 02:42:46,460] multiqc [DEBUG ] No samples found: mirtop
[2023-07-01 02:42:46,466] multiqc [DEBUG ] No samples found: homer
[2023-07-01 02:42:46,470] multiqc [DEBUG ] No samples found: macs2
[2023-07-01 02:42:46,474] multiqc [DEBUG ] No samples found: theta2
[2023-07-01 02:42:46,478] multiqc [DEBUG ] No samples found: snpeff
[2023-07-01 02:42:46,484] multiqc [DEBUG ] No samples found: gatk
[2023-07-01 02:42:46,488] multiqc [DEBUG ] No samples found: htseq
[2023-07-01 02:42:46,493] multiqc [DEBUG ] No samples found: bcftools
[2023-07-01 02:42:46,497] multiqc [DEBUG ] No samples found: featureCounts
[2023-07-01 02:42:46,503] multiqc [DEBUG ] No samples found: fgbio
[2023-07-01 02:42:46,523] multiqc [DEBUG ] No samples found: dragen
[2023-07-01 02:42:46,527] multiqc [DEBUG ] No samples found: dedup
[2023-07-01 02:42:46,531] multiqc [DEBUG ] No samples found: damageprofiler
[2023-07-01 02:42:46,550] multiqc [DEBUG ] No samples found: biobambam2
[2023-07-01 02:42:46,554] multiqc [DEBUG ] No samples found: mtnucratio
[2023-07-01 02:42:46,556] multiqc [DEBUG ] No samples found: picard
[2023-07-01 02:42:46,560] multiqc [DEBUG ] No samples found: prokka
[2023-07-01 02:42:46,564] multiqc [DEBUG ] No samples found: samblaster
[2023-07-01 02:42:46,571] multiqc [DEBUG ] No samples found: samtools
[2023-07-01 02:42:46,575] multiqc [DEBUG ] No samples found: sexdeterrmine
[2023-07-01 02:42:46,580] multiqc [DEBUG ] No samples found: bamtools
[2023-07-01 02:42:46,584] multiqc [DEBUG ] No samples found: jellyfish
[2023-07-01 02:42:46,591] multiqc [DEBUG ] No samples found: vcftools
[2023-07-01 02:42:46,598] multiqc [DEBUG ] No samples found: longranger
[2023-07-01 02:42:46,602] multiqc [DEBUG ] No samples found: stacks
[2023-07-01 02:42:46,606] multiqc [DEBUG ] No samples found: varscan2
[2023-07-01 02:42:46,617] multiqc [DEBUG ] No samples found: bbmap
[2023-07-01 02:42:46,622] multiqc [DEBUG ] No samples found: bismark
[2023-07-01 02:42:46,626] multiqc [DEBUG ] No samples found: biscuit
[2023-07-01 02:42:46,630] multiqc [DEBUG ] No samples found: hicexplorer
[2023-07-01 02:42:46,634] multiqc [DEBUG ] No samples found: hicup
[2023-07-01 02:42:46,638] multiqc [DEBUG ] No samples found: hicpro
[2023-07-01 02:42:46,642] multiqc [DEBUG ] No samples found: salmon
[2023-07-01 02:42:46,646] multiqc [DEBUG ] No samples found: kallisto
[2023-07-01 02:42:46,651] multiqc [DEBUG ] No samples found: slamdunk
[2023-07-01 02:42:46,655] multiqc [DEBUG ] No samples found: star
[2023-07-01 02:42:46,659] multiqc [DEBUG ] No samples found: hisat2
[2023-07-01 02:42:46,664] multiqc [DEBUG ] No samples found: tophat
[2023-07-01 02:42:46,668] multiqc [DEBUG ] No samples found: bowtie2
[2023-07-01 02:42:46,672] multiqc [DEBUG ] No samples found: bowtie1
[2023-07-01 02:42:46,676] multiqc [DEBUG ] No samples found: snpsplit
[2023-07-01 02:42:46,679] multiqc [DEBUG ] No samples found: kat
[2023-07-01 02:42:46,683] multiqc [DEBUG ] No samples found: leehom
[2023-07-01 02:42:46,688] multiqc [DEBUG ] No samples found: adapterRemoval
[2023-07-01 02:42:46,692] multiqc [DEBUG ] No samples found: clipandmerge
[2023-07-01 02:42:46,696] multiqc [DEBUG ] No samples found: cutadapt
[2023-07-01 02:42:46,700] multiqc [DEBUG ] No samples found: flexbar
[2023-07-01 02:42:46,704] multiqc [DEBUG ] No samples found: kaiju
[2023-07-01 02:42:46,708] multiqc [DEBUG ] No samples found: kraken
[2023-07-01 02:42:46,712] multiqc [DEBUG ] No samples found: malt
[2023-07-01 02:42:46,716] multiqc [DEBUG ] No samples found: trimmomatic
[2023-07-01 02:42:46,720] multiqc [DEBUG ] No samples found: sickle
[2023-07-01 02:42:46,724] multiqc [DEBUG ] No samples found: skewer
[2023-07-01 02:42:46,728] multiqc [DEBUG ] No samples found: sortmerna
[2023-07-01 02:42:46,732] multiqc [DEBUG ] No samples found: biobloomtools
[2023-07-01 02:42:46,747] multiqc [DEBUG ] No samples found: fastq_screen
[2023-07-01 02:42:46,751] multiqc [DEBUG ] No samples found: afterqc
[2023-07-01 02:42:46,755] multiqc [DEBUG ] No samples found: fastp
[2023-07-01 02:42:47,380] multiqc.modules.fastqc.fastqc [INFO ] Found 26 reports
[2023-07-01 02:42:47,913] multiqc [DEBUG ] No samples found: pycoqc
[2023-07-01 02:42:47,928] multiqc [DEBUG ] No samples found: minionqc
[2023-07-01 02:42:47,932] multiqc [DEBUG ] No samples found: multivcfanalyzer
[2023-07-01 02:42:47,937] multiqc [DEBUG ] No samples found: clusterflow
[2023-07-01 02:42:47,941] multiqc [DEBUG ] No samples found: bcl2fastq
[2023-07-01 02:42:47,945] multiqc [DEBUG ] No samples found: interop
[2023-07-01 02:42:47,950] multiqc [DEBUG ] No samples found: ivar
[2023-07-01 02:42:47,954] multiqc [DEBUG ] No samples found: flash
[2023-07-01 02:42:47,960] multiqc [DEBUG ] No samples found: seqyclean
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2023-07-01 02:42:47,960] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'.
[2023-07-01 02:42:47,961] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'.
[2023-07-01 02:42:47,961] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'.
[2023-07-01 02:42:47,961] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'.
[2023-07-01 02:42:47,961] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'.
[2023-07-01 02:42:47,991] multiqc [INFO ] Compressing plot data
[2023-07-01 02:42:48,463] multiqc [INFO ] Report : multiqc_report.html
[2023-07-01 02:42:48,463] multiqc [INFO ] Data : multiqc_data
[2023-07-01 02:42:48,463] multiqc [DEBUG ] Moving data file from '/state/partition1/job-35089197/tmp9_0xkmrl/multiqc_data' to '/scratch/gencore/logs/html/HGNH2AFX5/merged/multiqc_data'
[2023-07-01 02:42:48,577] multiqc [INFO ] MultiQC complete