FastQCFastQC Report
Thu 24 Jun 2021
HGMJ7DRXY_n01_ZmTARGET.20210524-KN1-minusN-02.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGMJ7DRXY_n01_ZmTARGET.20210524-KN1-minusN-02.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTATATAAGCCTTTGTGTCTGCATCAGTTTATACTAAATACTATGAA15.263157894736842No Hit
GAATGGTATACATAGAAAAAAAAAAAAAAAAAAATCGGAATAGCACACGA15.263157894736842No Hit
ATCATATATATTTCTGTTGAATTACGTTAAGCATGTAATAATTAACATGT15.263157894736842No Hit
TGAGGTTATAAAACATATCTCTCTGTAGCACCCGTGCTAAGTACTCTATG15.263157894736842No Hit
AAAACGTATAGGACGACGACATCAAGGACTACGCCGGGAAGCTCTTCTGA15.263157894736842No Hit
GCCGCTTCTCCAACAACGTCTGCAAGAAGGCCGACATCGACATGAACAAG15.263157894736842No Hit
CCGATCTATAACGATGCCGACCAGGGATCAGCGGGTGTTACTAATAGGAC15.263157894736842No Hit
TTACGATATAAATGTGCATTCAAAGTGTCAACTATTTATGAACTTTTATA15.263157894736842No Hit
GGGAGTTATAATATCGGGTGGCGAACTCTGCGACAATTTCAGAGTTGTTT15.263157894736842No Hit
CCTATATATAGTATTCATCGGTGCGGGTAGCTCTGCAATTAGATGTTAAG15.263157894736842No Hit
GCCGCCTATAAGAAGTGGTGGCAATGGAAGTCTTTGTGAATCATGAATGG15.263157894736842No Hit
CATGGGTATATAGGCTTGCGGTGGATACCTAGGCACCCAGAGACGAGGAA15.263157894736842No Hit
AAAGGGTATACGGTGGATGATGATGTGCTAAATACCTAAGTGTAATACTC15.263157894736842No Hit
ATTTAATATATCAGGCCTTATACACACAAGCAATGGAGAGCAAACAAAGG15.263157894736842No Hit
ACGTCTTATAAAGTTTCTTAAGATTGAATCCTGTTGCCGGTCTTGCGATG15.263157894736842No Hit
AGTGCATATATCCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCCT15.263157894736842No Hit
CTAAAATATAAAATCAAATTATAAACACTACACAAATGAAAACATTGAAA15.263157894736842No Hit
CCAACATATAAAGCCGCCAACAACTGGAGATTCCTTATGCTATTGTTGCT15.263157894736842No Hit
TATTCTTATAAGTGGTCGCATGGCTGAAACTTAAAGGAATTGGCGGAAGA15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)