FastQCFastQC Report
Thu 24 Jun 2021
HGMJ7DRXY_n01_ZmTARGET.20210504-G2plantUT5628-plusN-04.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGMJ7DRXY_n01_ZmTARGET.20210504-G2plantUT5628-plusN-04.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7002256
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCATATAATTTCTGTTGAATTACGTTAAGCATGTAATAATTAACATG77470.11063577224254582No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)