FastQCFastQC Report
Fri 4 Sep 2020
HGLKFAFX2_n02_HTO3_0824.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGLKFAFX2_n02_HTO3_0824.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92
Sequences flagged as poor quality0
Sequence length116
%GC93

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3436.95652173913043No Hit
CTGAGCTCGCCTGCAGTCGGGCTTTCGGGGGGGGGTGGGGGCGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGGGGTGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
TGGCGGCTGCTGGGCTCGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GTGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GTACTGTCGGGCGTTGTACGCGGGTGGGACCGTCAGGGAGTCGCTGCTCG11.0869565217391304No Hit
GCGTTTGGGGCTCGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GTGCGCTGGCGGGGGGGGGGTGGTGTGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGCGGGGGGGG11.0869565217391304No Hit
GAGGGGTCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
CGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GCGCTAGGGCGGGCGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGG11.0869565217391304No Hit
GGGGGGGCGGGGGGGTGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
TCGGGCTGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GTGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GCATGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
TCGGGGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTGGGG11.0869565217391304No Hit
GGGTTCTGGCGGCAAGGTTCGAGTGCGGCCGCCCCGTCAGCCGGTGCTAG11.0869565217391304No Hit
GGTTGGGCCGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGCGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGTGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
TGATGGTAAGGGAGGGATCGTTGACCTCGTCTGTTATGTAAAGGATGCGT11.0869565217391304No Hit
GTGCGCGGAGGCGGGGTGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
CGGGGGGCGGGGGGTGGGGTGGGGTGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
ACGGGGTGCGCGGCGGTGGGGCTGGGGGGGGGGGGGGGCTGGTGGGGGGG11.0869565217391304No Hit
CTAGGCTCGGGGCTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GCGGTGGCTCGGGTCGCGGTGCGGGGGGGGGGTGGTGGGGGGGGGGGGGG11.0869565217391304No Hit
GCTTGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGTGTGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGCCGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
CAGCTTAAATTTAATGTGACCGTTTATCGCAATATGAAGAACACTCGCGA11.0869565217391304No Hit
GGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
CTCGTCACAGTGCTGCTGGTCCCCCAGGACACACACAGAGAACTTAGGGT11.0869565217391304No Hit
GTGCGGGGGCGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GCTTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGCGGGCAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGCGGGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGACCAACATGGGCATTTTGTTTATGAGCAAGGTGGGTCTCAGAGGTGAT11.0869565217391304No Hit
GGGGGGGGTGTGGGGGGGGGGTGTGGGGGGGGGGGGGTGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGGGGGGGGGGGGGGCTCGGGGGGGGGGGGGGGGGGGGGGGGGTG11.0869565217391304No Hit
GCATAGCTCTTAAACTTTCTAAGCTGGGTCAGGGCCCCCATATAAGAAAG11.0869565217391304No Hit
GGGGGGGCGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GTGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GCGGCGGGGCGGCGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGCGTGCTAGCCAGCGGGTGACGACGGGAGACGAGCGCACTGTGTAAATC11.0869565217391304No Hit
GGTGGTGACAGCAATTACAAAGCCATACTTCCCTGTGCAGGTCCCCTCCA11.0869565217391304No Hit
GTGTGTGGGCGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GCCAAAGCTGTCAAAGAACCTCTGGGTCCATGGGTAGACAACCAGGAGCC11.0869565217391304No Hit
AACAGACCCCTTGGTAGGGCTTAATGCGCGATTGCTCCCCCTTGAGATGT11.0869565217391304No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0869565217391304No Hit
GTGGGGGGGGGTGGAAGGGGGCGTCGGGGGGCGTGGGGGGGGCTGGGGGG11.0869565217391304No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGGGG50.0110.0110
Produced by FastQC (version 0.11.5)