FastQCFastQC Report
Wed 2 Sep 2020
HGLJYAFX2_n02_dpr183.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGLJYAFX2_n02_dpr183.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences391
Sequences flagged as poor quality0
Sequence length76
%GC50

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTCTCTTATACACATCTGACGCTGCCGACGAGATAGAACGTGTAGATC10526.854219948849106No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG164.092071611253197No Hit
CCGCAGTCCAGCGCCGAATCCGGGTTGACCCGGGCGCCGCGCGCTCGCCC112.813299232736573No Hit
GGGCTGAAGCCGTCGGCGGGCCGGGCTCTTTGTCTGCGCTGCTGGTGCTG102.557544757033248No Hit
GGGGCGTGTGTCCGCTTTCCCCTGGGCCTGATTGGTTAGTGCTCCCCCAG71.7902813299232736No Hit
GGAGAGAATCAGTTGCTTTTACCGTTGTACAACGTATTCTGAGACAGGAG71.7902813299232736No Hit
CCCTGAAACATTCTTTAAGTAGACGGCTAAGCGCTCTGGAACCAAAACCT61.5345268542199488No Hit
GCTCTGAGCTGGGACAGTGTCCCAAGGGAAAGATATCCTGAGACACAGGA61.5345268542199488No Hit
GAGTTAGAGACAGAGACAGAGAGACAGACAAAGGGACAGCGAGACAGACA61.5345268542199488No Hit
GTCTGTCTCTCTGTCACTGTCTCTCTGTCTGTCTCTTTCACTCTCAGTTT51.278772378516624No Hit
AATCTAGACATATCTAGGCAGAGGAACCTTCAGGTGAGAAAATGCCTCCA51.278772378516624No Hit
GTCAGGGAATGGGCCAAAGTTCATGGACAAGGCATTAATAATAAACAATT51.278772378516624No Hit
CACCAGAAGAGCATTGAACACAGTACGGATTGACTTAGCGTATCATTTCC41.0230179028132993No Hit
GTGCTAGCACTTACCAAACAGTAACACAGCTCTCTCTGTTTTATAGCTGG41.0230179028132993No Hit
GTGCAGGAGATATGTGCCTGTGAGAGCAATTGTCCAGGGAGAAGAGAAGA41.0230179028132993No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAAATAGAACGTGTAGATC41.0230179028132993No Hit
GATATCGAGAGATAGAGAGACAGAGACAGAGATAAAGAGACAGACATACA30.7672634271099744No Hit
CTAGTGGACTCTGTAGGATGTAAACATGGAAAATTTATTCTCAGGTTTCT30.7672634271099744No Hit
CTTCTAGACAGCCTTACTATCCACACTGCCTTACCTGATCCCTGAGGTGC30.7672634271099744No Hit
AGGAAGCCTCCAGTGGCATTTGAAGCTGACTCTTCTTGGACCCTGAGGAG30.7672634271099744No Hit
GTCCAGAACACTCTACCCACCATGAGTTCTGAGCTCAGAGCTGGTTACTC30.7672634271099744No Hit
GAAACACACTGTACAGCTTTGAGAAAAGGTCATGACTGGGCACATTGGAA30.7672634271099744No Hit
TTGTAGAACAGTGTATATCAATGAGTTACAATTAAAAACATGGAAAATGA30.7672634271099744No Hit
GAGTCACACCAGTAGGACCTGGGAAGGAACATTGTGAGCCTAAGAGCAAC30.7672634271099744No Hit
GATGCAGACTCGGGCTTGGTCCCCGGGGAGAAGGAAGCAGGGAGAAGGAA20.5115089514066496No Hit
CTGTCTCTTATACACATCTGACGCTGCCGTCGAGATAGAACGTGTAGATC20.5115089514066496No Hit
AATCCAGACTGACCAAGGGAATACTAATGTCCCTCGTCTTGGTGATGTCC20.5115089514066496No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAGATAGAATGTGTAGATC20.5115089514066496No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACAAGATAGAACGTGTAGATC20.5115089514066496No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAAACCTAGCCCTAGCC20.5115089514066496No Hit
TTGTTATTCTGTGTGTCTTAGGTCTCTGGCATGAAGCCCTCGCCTCTGGC20.5115089514066496No Hit
GAGCAACGACGCGCAATCGGGAGAAACAAGCGAGATAGGAATGTCTTACA20.5115089514066496No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG20.5115089514066496No Hit
CGTCTACTACTTTGAGTTCTTCTGTTGTTGTATTCTTCACAATTGCTGCC20.5115089514066496No Hit
ACTCTGTGCTGGCCATCATGCTAAGTCCTGAGATTCAGCCGGGACTAAAG20.5115089514066496No Hit
GAGACAAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGCAGA20.5115089514066496No Hit
GTCCCAGACACACAGTGCCTAACCCATGTTTCATACTCCCCCTAAGCATC20.5115089514066496No Hit
GTGAAATCCGGTTCAGACTTGCACAAGTGTTGTTTCCCAGTGAGCATCTC20.5115089514066496No Hit
CTGCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGA20.5115089514066496No Hit
GTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCAGGTATTTTGCAAGTT20.5115089514066496No Hit
GGGCTAAGAGTGGGTTGGTGGTCTTGATATGGTCAGGGTCTGGTTGATGT20.5115089514066496No Hit
GGAGGGAAGCCCACTTGCTTGTTGAGTCATATCCCTGGTTCACTTAAAAA20.5115089514066496No Hit
GGACATCAAGTGGAGGATTGGGTTGCCATCTCACTGTCATAAACTCTGAA20.5115089514066496No Hit
CTGTCTCTTATACAAATCTGACGCTGCCGACGAGATAGAACGTGTAGATC20.5115089514066496No Hit
GCTTCAGGCTGGGGGAGGTTATAGCTCAGCTGCCTCCCAGCAGGTAGCAG20.5115089514066496No Hit
GCCTAAGCCACAGCAGCAGCGGTCGCCATCCTGGTCCGAGACCCGCCGAA20.5115089514066496No Hit
CTAGTTGGTCCATCCTTTCATCACAGCTCCAAACTCTGTCTCTGTAACTC10.2557544757033248No Hit
GAGTGGGAGGGTTCCCACACCTAGGGTTAGCTTGGCTTTCTCCTTCAACT10.2557544757033248No Hit
ACTCATTGTTCTGCACTCACTACACTTACCACACTCACCACAATGCACTC10.2557544757033248No Hit
GTCTGAATCTGTCTCCCTGTCTGTCTGTCTCTCTGTCACTGTCTCTCTGT10.2557544757033248No Hit
GGGCTAAGAGTGGGTTGGTGGTCTTGATATGGCCAGGGTCTGGTTGATGT10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAGATAGAACGGTGTAGAT10.2557544757033248No Hit
CTTCTATGCTGTGCTCAGGACCACCTCCCCTTTGCTGAAGTGGGATGATT10.2557544757033248No Hit
GGGAAGACCTCACGTGCTGGGCTTTGTGTTGCTGTCAGAGCTTCTCCTTA10.2557544757033248No Hit
ACAATGATCAGCAAACTGAGTTATGGGTGAGAGATGTGAGAATTTTTTCC10.2557544757033248No Hit
CTGTCCCTGTACCCTCTAGTTAGTCTGGCTAGGGGTTTATCTATCTTGTT10.2557544757033248No Hit
CCTCTGAGCTCGGACAGTGTCCCAAGGGAAAGATATCCTGAGACACAGGA10.2557544757033248No Hit
CTGTCTGTTGGGCGCGTCTGGCGGTGGGGGGGAGGTAGGGGGTGTGGGTC10.2557544757033248No Hit
GTGCCAGGGTAACCTCGGCTCGGACATTGAGCGGGTCCCCGCCCCGGAAT10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGGCGAGATAGAACGTGTAGATC10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAAACAAAACCCTAGCC10.2557544757033248No Hit
GAAATAGAACCGGACATAAAAGAGGACGCTTAGCCAAGAGACGGCAAGAA10.2557544757033248No Hit
GGTCTGGAAGGAGTGCCTGGGTCGTGTTTCTACGGAGTGAATCAGCAGGG10.2557544757033248No Hit
GGGTTACAGCTAGGGTTAGGGTTACGGTTACGGTTAGGGTTACGGTTAGG10.2557544757033248No Hit
GAAGAGAGCAAGCTAGCAGCTAAAGAGGATGTGCCTCTGGACACTTACTG10.2557544757033248No Hit
CTTCTATGCTGTGCTCAGGACCACCTCCCCTTTGCTGAATTGGGATGATT10.2557544757033248No Hit
GGCATTAAATCAGTTTCTGCTGTAATTGACAAACAATCTCGCAGCCCTCT10.2557544757033248No Hit
CAGAGACAGAGTCAGAGAGACAGAGACAGAGACAGAAAGACAAAGAGACA10.2557544757033248No Hit
ATCAATCTATCACCCAAGAAACCCAGCACACGACATATAACCTCTCCCAC10.2557544757033248No Hit
GTCTCTGTCCCTATGTCTGTCTCTCTGTCTGTCTCTCTCTCTCTCTCTCT10.2557544757033248No Hit
GGGAGCTGGTAGAGCTCTTTAGAGGGATGGGACATACGAAGGGCATGGGC10.2557544757033248No Hit
CTCTATACCTCTGTCTGACTCTAAGAAACTCTCCTCCTCCTCCTCCTCCT10.2557544757033248No Hit
CAGAGACAGAGTCAGAGAGACAGAGACAGAGACAGAAAGACAAACGGACA10.2557544757033248No Hit
CTGTGATCTTGGTCAAGTCACTTCGTGTATCCAGACCGTAGCTTCTGTAC10.2557544757033248No Hit
CATCTCCACTGTTAATTTTAAACAAAGTCCTATCATATCACTAGAATTGA10.2557544757033248No Hit
AGATTAGGGTTAGGGTTAGGTTAGGGTTAGGTTAGATTAAGATTAGGCTT10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACTAGATAGAACGTGTAGATC10.2557544757033248No Hit
CTTTCTCTTATACACATCTGACGCTGCCTACGAGATAGAACGTGTAGATC10.2557544757033248No Hit
GTGAGAGGGTATGTGTCTGAGAGAGACAGAGATACATAGAGACAGAGAGG10.2557544757033248No Hit
GCGGGCGAGTGGGAGGTTGCGGCGGACTGGTCCACTGCACCCTGGGAGTT10.2557544757033248No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGG10.2557544757033248No Hit
GGCCCGTCCCTTGTAAAGCGTCGCGGATCCCGCCGCTTCCGGTGAGCTCT10.2557544757033248No Hit
TCTGGGAAGAGCCTCCCCCAGGGCTGCTCCATGTGGCTCTGTTGCAGGGA10.2557544757033248No Hit
CTGTCTATTATACACATCTGACGCTGCCGACGAGATAGAACGTGTAGATC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCCACGAGATAGAACGTGTAGATC10.2557544757033248No Hit
CACAGGGCCTCCTTCCAGTTCTTTCCAGGGGCTGCATCCCACCCACGCAG10.2557544757033248No Hit
GTCTCTGTCCCTATGTCTGTCTCTCTGTCTGTCTCTCTGTCTGTCTCTCT10.2557544757033248No Hit
CTGTATCTTATACACATAAGACTCAGCCGACGAGATAGAACTTCTACATA10.2557544757033248No Hit
CATTAAACCCAAATCCTGTAACTAACCAAAAAAAAAAAAAAATACAACTG10.2557544757033248No Hit
GTCTCTGTCCCTATGTCTGTCTCTCTGTCTGTCTCTCTGTCTCTCTCTCT10.2557544757033248No Hit
CTCTCACTTATACACATCTGACGCTGCCAACGAAAAAGAACGAGAAGATC10.2557544757033248No Hit
GCTCTGAGCTGGGACAGTGTCCCAAGGGAAAGATTTCCTGAGACACAGGA10.2557544757033248No Hit
CTGTCTCTTAAACACATCTGACGCTGCCGACGAGAAAGAACGTGTAGATC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGACTACAAGATAGAACTTGTAGATC10.2557544757033248No Hit
GTGTGTATGTGTGTATGTGTGTGGTGTGTGTTTATTTGACTCAATAATCC10.2557544757033248No Hit
CTGTCTCTTCTACACATCTGCCGCTGCCGACGAGATAGAACGTGTAGCTC10.2557544757033248No Hit
GGCCCCAACCCATTTAGCCACAGGCCCAAACCCATTTAACCCCAGCGCAC10.2557544757033248No Hit
CATTAAACCCAAAGCCTGTAACTCACCACAAAAACAAAAACAAACTCCAG10.2557544757033248No Hit
GTACAGTAGATCACTGGTTAGTACCATATTAAGTCTGCATACTGACTTAT10.2557544757033248No Hit
CCTCACCCCTGCTCCCGCTCTTCCCCCCTCACCACCCCCCCCCCCTCCTC10.2557544757033248No Hit
GCTGTAGGTGGTGATGAGAAGCAGCACTGTATCTGAAATGGTGCTTGAGT10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAACCAAAACCCTAGCC10.2557544757033248No Hit
GTTTAGTCCTGTTTTGTGACCAATTATATTGTCAATTTTGTAGAGTGCCC10.2557544757033248No Hit
CTCTCTCTTATACACATCTGACTCTGCCGACGAGATAGAACGTCTAGATC10.2557544757033248No Hit
GACCATATGTGTGGGAGGCTGCGGATGGGTACAGATGCCCGTTTAGTTCA10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACTAGATAGAACGAGTAGATC10.2557544757033248No Hit
GTCTGTCTCTCTGTCACTGTCTCTCTGTCTGTCTCTATCACTCTCAGTTT10.2557544757033248No Hit
CATAAGAAAAAGGAATATGTCAACAAAACAAAAAAAAAATCAAAAACAGC10.2557544757033248No Hit
GCTGGGGATCGGAAGCGTTGGATGGGCCGCCGTCAACTGTGTCGGATCGA10.2557544757033248No Hit
AGTCACAGCTCATGCTGGCAAGAGTAAGGAGTAATGGGAACATTGCCCCA10.2557544757033248No Hit
GCTCAGGACACTGGCCTCGTCCACCACATCTTAGTGGGACTTTGAAATGG10.2557544757033248No Hit
GGCATAGGCATAGGCATAGGCATAGGCATAGGCCTGTCTCTTATACACAT10.2557544757033248No Hit
CTTTAAACCCAATATCTGTATCTCACGACAAGAACTAAAACATAAAACTG10.2557544757033248No Hit
CAGTCTCTAAAACACAAAAGACCATGAAGACGAGATAGAACTTCTACAAC10.2557544757033248No Hit
CATTAAACCCAAAGCCATTAGCAAACCACAAAAACAAAAACATACACCAG10.2557544757033248No Hit
ATTTAAAGCCAATTTGTCTTGAAAGAGTCTTTCTAGAAACTGAAAAATTC10.2557544757033248No Hit
GTTATCAGGCAGCCTAAAAATACAATTAGACTAATGATGGCTTAAAGTAA10.2557544757033248No Hit
GTCTGAATCTGTCTCCCTGTCTGTCTGTCTCTCTGTCACTGTCTCTCTCT10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAAACATAAACCTAGCC10.2557544757033248No Hit
GTCCTGGTTCTCCCTTCTCCTTCCTTCTCCCTCCTTCAATCACCCCACCA10.2557544757033248No Hit
GTGGATATTTCTAAATTTTCGACATTTTTCAGTTTTGCTCGCCAAATAAA10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAGGTAGAACGTGTAGATC10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAAACAAAACCCTAACC10.2557544757033248No Hit
AGCGAACACTGACACAAATTACTAATTCAACTACAAAGCCAAGCCAACCA10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTACCCCTAGCCCTAGCC10.2557544757033248No Hit
CCCCACTCCAGCGCCCAATCCGGCTTCACCCGGGCGCCGCGCGCTCGCCC10.2557544757033248No Hit
CGTCAGGCTGGCTGGAAGGAAGTTCCAAGCCCATCATATGTCATTCAGCG10.2557544757033248No Hit
AAATGCACACTGTAGGACCTTGAATATGGCGAGAAAACTGAAAATCACAG10.2557544757033248No Hit
CCATACCTGGGGTGAGCATAGCATCACACAGCCTGCCGGGGGAGCCACTG10.2557544757033248No Hit
ACCATGTCTGGAACACCCAACCCCAAAAAAATTCTTATCTGCTAGGTGGG10.2557544757033248No Hit
CAGAGACAGAGTCAGAGAGACAGAGACAGATACAGAAAGACAAAGCGACA10.2557544757033248No Hit
CTATACTTCGTAAGAAAGATGTAAGAAGTATACTTAACTGAGAAAGTTTC10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAACCATAACCCAAGCC10.2557544757033248No Hit
CGGTCTCTTATACACATCTGACGCTGCCGACGAGATAGAACGTGTAGATC10.2557544757033248No Hit
CCCTAGCCCTAGCCAAAAACCTAACCCTAACCCTAACCCAAACCCTAACC10.2557544757033248No Hit
GCCCATAGGTAATTTAAAACCATAACTGAAAGGATTCCAAGATGCTTTCT10.2557544757033248No Hit
CGTCATCCTTCTTCAAGCACTTCAGCGTCTCCAGCAAACTCTGCAGGATG10.2557544757033248No Hit
AGCCTAGTCAGGGATCTGGTGCTAACCGAACCTCCGGAGCTGCTAGATCC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACTCTGCCGACGAGATAGAACTTGTAGATC10.2557544757033248No Hit
ATGCAAAACTATATACTCAAAGACTGAAGCTAAGTTTTAAGACATGTGGT10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGATGCCGACGAGATAGAACGTGTTGATC10.2557544757033248No Hit
CTCACACTAAAACACATAAAAAGCATCCAACGAAAATTAAGGTGTATATC10.2557544757033248No Hit
CACAAAATAATAATCCTCTCCATCTCCCCCAGATATACAACCACAACCTC10.2557544757033248No Hit
CTGTTCTTATACACATCTGACGCTGCCGACGAGATAGAACGTGTAGATCT10.2557544757033248No Hit
GTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCAGGTATTTTTCAAGTT10.2557544757033248No Hit
GGGGAGGAGTCCGGCAGGCCGGGTCTGAAGAAAGAAAGCGAGGACCAGGA10.2557544757033248No Hit
CCATAGCCCTAGACAAAAACATAACCCTAAACCTAAACCAACCCCTAACC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAGAGTTAAGCTTTAGATC10.2557544757033248No Hit
CTATCTCTTAAAAAAATAACACTCTACAGACTAAATTTAACCATTAGATC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAGATAAAACGTGTAGATC10.2557544757033248No Hit
GTGCAGGATGGTGCCAGCCCTTAAATCTCCATGATGCTGCCTCTCACTTG10.2557544757033248No Hit
ACATTGGGGGCTGATCTTCTCTTAACTCTCATCGGTGCAGCCACATCAAA10.2557544757033248No Hit
ATCAGACAGTATGCTGTTGAGGACTAAAGTTGTAATAATAGAATAAGACC10.2557544757033248No Hit
AACTAACCCAAAACCAAAACATAAACATAAAACTAACCCAAAAACATACA10.2557544757033248No Hit
CATTAAAAAAAAAAAAAAAAACACAAACCACCAAAAAAAAAAAATAAAAA10.2557544757033248No Hit
CTGTATAAAATAAAAAAATACAGATTACCACTAAAAAAAACATTATTATC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGAAGACGATATAGAACGAGTAGATC10.2557544757033248No Hit
CTGTCGCTTGTGCGCATCTGGCGCTGCCGGCGAGATAGCACGTGGAGGGG10.2557544757033248No Hit
ATATTAAACTTGCAACAGTTAAAAAGATCGTACTTGGATATAGGCAGAGG10.2557544757033248No Hit
CCCTATCCCTAGCCAAAAACCTAACCCTAACCCTAAACATAACCCAAGCC10.2557544757033248No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGATATAGAACGTGTAGATC10.2557544757033248No Hit
GAACAGCAAAAACACAAACCAGCACCTAACAAGAAAGTCAAGTACAAGAT10.2557544757033248No Hit
CACACTATTAAACACATATCAACAACACAACTAGATACAACATCTAAAAA10.2557544757033248No Hit
GACCGGCCGCCCTCCGAGGAAGAGGATCCCCTTAATCCTCTAGAACCTAG10.2557544757033248No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers