FastQCFastQC Report
Tue 25 Oct 2022
HGKL5DRX2_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGKL5DRX2_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1000759972
Sequences flagged as poor quality0
Sequence length10
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGCTTGTG94546733894.47493549432251No Hit
GGGGGGGGGG370362573.700813185601712No Hit
ATGGGTGGGT25934240.259145456708974No Hit
ATGGCTTGTT21936040.21919381883511224No Hit
ATGGCTTGGT20065090.20049852673364116No Hit
ATGGCTGGGT17502740.1748944850883784No Hit
GTGGCTTGTG12374560.12365162822479475No Hit
NTGGCTTGTG11029680.1102130411746724No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)