FastQCFastQC Report
Mon 10 May 2021
HGJM2BGXJ_n02_ReSeq_Blank_Well2_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGJM2BGXJ_n02_ReSeq_Blank_Well2_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGATTGCTGCTGCCCTCTACATCATAACGTGGGGGACACCTCATGC11.694915254237288No Hit
CCTCTGTACTCAGCTTCCTGATCTGAAAAAGGGGAAGAATATTAGGGACA11.694915254237288No Hit
CTCCGGAGCCGTAACTGCCACCTCCAGAACAATAGCCGCCACCGCTGCCG11.694915254237288No Hit
GTGGTGTTCCCGCTGCCGTCCCCGGGGCAGCCATCAACTTGAGCCATGCA11.694915254237288No Hit
GTTAATGGATGGTAACCATATAGATTATAAAATGGCTAGAGCTGGGACCC11.694915254237288No Hit
CCCACAGCCACGGCGCATTCCCATACACCCTTCGGTCCCAGGCAGCTGAC11.694915254237288No Hit
ACATGCTACTGAACAACCAATTGGGTTCATGGGCAAACCAAAATAGGAAC11.694915254237288No Hit
CGTTCTCCTGCAGCCAGGCCTGCACCTTCTTCATGCAGCCCTCATGGTAC11.694915254237288No Hit
ACTTTGGAGTTTGTGGACAAATAAAGACTGGGTCGTAAATACTGGGTTCA11.694915254237288No Hit
AGCCAAACAGCTGTGCTCTGAATCAGCTCAGCAGGCAGCTGCTGGGTGCC11.694915254237288No Hit
AGATAGCTCTTTACCAAATTTTGAGATTACTGTAAGGTGTTGGAGGTTGT11.694915254237288No Hit
AAGCAAAAGTCCAGGACCCCATGGTTTCACCTGTGAATTCTACGAATCAT11.694915254237288No Hit
TACCTGCACAGACCATTTCATTTTCATAATATCGACCCGGATAAAACCTG11.694915254237288No Hit
GTACAGTTCAGTCTAGACACAAATGATGTGGTGGAATCTCCTAGTCTGCG11.694915254237288No Hit
CTCTGTAATAATGGTTTGCACTAGTTTTTTCGTTCTTAAAATGTTAGCTC11.694915254237288No Hit
CAACAAAACAGAGAGTTCAGGCTCGAAATACAAAAGGCACCTCCAGAACG11.694915254237288No Hit
GGGAATAATCATGTCTACTTGTCACAAGTATCCGAGTAGGATTAGAGATA11.694915254237288No Hit
TTGCAAGACAGAAGGATCCACTTTGGCCATTGTTGACACACCAGAGAAAT11.694915254237288No Hit
GGGCAGCCTGGCCATGTCTTTCCAAAGCTGCAAATGCCCAGCCCTTCCAT11.694915254237288No Hit
TTCATACTTGTCATTTTCAATGAGTGCACAACACTTCCCTCCTGTGACCG11.694915254237288No Hit
GAGACAGACTGAGCAGGAACAGGGAACAAGAGATAAAACACAACAGCACC11.694915254237288No Hit
GAAGGGTCCTCGCAGACAGTATGAAGCCGGGATACCCAGTATCTCCAATA11.694915254237288No Hit
CCCACATTACAGGCCTGTACCCGGCTCGTCACTCACCTCCCGCGCTCCCC11.694915254237288No Hit
AAAGCAGGGGGAGCAGTAGAGGAAGAGGGAGAAGCAGGCTCCCCACCAAG11.694915254237288No Hit
CAGTCTTCCACACGGTTTTATTGCATAGAAACACAACAATTTAGATCTCA11.694915254237288No Hit
ATATGGGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTGAC11.694915254237288No Hit
TTCATTTACTGTTAAAGACAAAGACATGAAAGAAGGGCTTTCTGGTCCTG11.694915254237288No Hit
GAGCCACACAGGCCCGTCGTGGTTCGTTTTTATAAAAATCATTCCACCTT11.694915254237288No Hit
CTGCTGAGCAGCTGTTGGGAAATCTGCAAAGAGGCCAAGGACAGAGAGCT11.694915254237288No Hit
CCTCTACCTGTATTCTTCTTATCAAGAGCCAGTGAAGTTAATCTCATAGT11.694915254237288No Hit
GCTGTGGCCACAGTAGGTAGCTGCCCTCCATGAACCCCTTTCCTCACCCA11.694915254237288No Hit
ATATACTTCTCTCAAGTGCCCCTAGAACGTTCTCCACCTTATATCATATG11.694915254237288No Hit
AGCGAAAGCAGGGAGGAAGCAGAAGCAAACACCATCCCCAGGGAACAGCG11.694915254237288No Hit
GCATGGACCTCTACACTGCCTCGGCTTTCCTCCCAGAGGAGACAAGTTTC11.694915254237288No Hit
ATGTTGCCCCATTAAGCTCATCAAGTAACTCATCAATGACTGGAATAGGA11.694915254237288No Hit
GGTTGTCCAGCCGCGAGCTGTGCCGGTGGGCCGCACCATGCGTCCACAGG11.694915254237288No Hit
ATAAATAACAGGATGATATTTGCTGTGGGTCTTTCATAGATACATTTGAT11.694915254237288No Hit
CAATACATCTACCTGCAGAACCACTTCATAACGGAGCTCCCCGGCGAGAC11.694915254237288No Hit
GGGATCAGGTATACAGAAAAGCACACAGAGAGGAGTGTATGGATGCACTG11.694915254237288No Hit
CCCTTCTCCCAGCTACACAAGACAACAATCTTCGGCACAAATATATCCCA11.694915254237288No Hit
TAATGGTACCGAATGGAATGGAATGCAATGGAACGGAATGGAATGGAACA11.694915254237288No Hit
CCCTTCTGCGAAAGCAGACTTCAGGGTCCAGCGCACGCCCAAAACTTCTC11.694915254237288No Hit
TTTCGCATACAATGTCAGACCTGACAACAGTATATTTCCATTTCCTCCCT11.694915254237288No Hit
GGACAGAGGAGAACAATCATCAGTCACAAGGATACTTCTGTAATATCTGT11.694915254237288No Hit
ATCCAAAGTGCCATGCCAGTGCTGAGGAGAGAGGGTTTACTTTCAAGCGG11.694915254237288No Hit
GATAAGTTATCATTCAGGTCAGCAGCAGAAAGGTGCCTGGTCTAGACCAT11.694915254237288No Hit
ACTCCCCACTGAACCTGATGGTGAGTTTCCTCTTTGGGGAAATACATGGA11.694915254237288No Hit
CACACAAGCAGGGGGAGCGGCAGGGAGCGGGAGAAGCAAGTCCCTGCTGA11.694915254237288No Hit
TAATAGGAGTATGTACAGATACAACTATGAGAATGGCCTTCTGAGGGGAC11.694915254237288No Hit
TAGATGCCCTCTGCAAATAGGATAGCTTGGCTCTCATTTCCCAATTTTAT11.694915254237288No Hit
GGGAAAGGGGAAGAGCTGGGCGGAGGCAGTTAGGGACAGAGGAGAGAGGA11.694915254237288No Hit
GGGAGTGGGAGAGGAAGAAGCAGGGTCCCCGCTGAGCAAGGAGCCTGATG11.694915254237288No Hit
ACACAAGACTACAATGAACTGCACAAATATATCCCCTGGACTTGAGTGGC11.694915254237288No Hit
CTCTTTTAGCTGTGGCATATTACATATTAGAAAACAAAAACATATATGCA11.694915254237288No Hit
CCAGAACCCCACGCCCAGGTCACACTTGGGATTGCCAGCTACAGGCCACT11.694915254237288No Hit
GTACCGTCCAATTAAATCCTATCTGCTATGAGGAAAGTCTCATAATCTCA11.694915254237288No Hit
GAAGCCGCAGGCCAGTTGGACTATGCATTCAGTCCGGCTCATTTATGAGT11.694915254237288No Hit
ACCATATAGTGTGAGCCTAACTAAAGCAATCTTGGAGAAATCCACCATAA11.694915254237288No Hit
CAGCAAAAGCAGGGGGCCCAGCAGACAGAGGGGAAGGAAAAGCAGGCTCC11.694915254237288No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)