FastQCFastQC Report
Mon 10 May 2021
HGJM2BGXJ_n02_ReSeq_1983_d08_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGJM2BGXJ_n02_ReSeq_1983_d08_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGATACCCCTGGTGGGGAAGCTTCCCCCACACAAAGCATTGATTTTAA13.125No Hit
CCTCAAGGTTCTTTAAACTCTTAACGGTTTCCATTAAGTAAGTCCAGAAG13.125No Hit
GATAAGGGAGGCAAGAAAATTCACTGGGGAAAGAAAGTCTGTTCTACAAA13.125No Hit
ATCAACGACAACACATTATTCTTAAACAGATAAAAAGGGATAAAATTTTG13.125No Hit
GCCAGAAAGCAACACATGTTTATTGAAGAATAGTGGGAAACCCCAGAGAA13.125No Hit
GGGTAGGAAACCAGCTTTAGGAACTCGGTGCTTTCCAGATATTGTCTTTA13.125No Hit
TCTCAATTCTACGAATCATCCACAGAAAAAAAATCAATACCAATCCTTCT13.125No Hit
GTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGGATTTTT13.125No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT13.125No Hit
CCACCCCACTCGTACCTCCACTCTCTCCTCAGTACAAGTGACTTTCCTGC13.125No Hit
CATGTCAGTGCGGGAGAGAAGCCCAAGGTGATCTTCCGGATCTAAACGGA13.125No Hit
GTGATAAATATCTTCTCCTTGACAGCTATGGTTTGAATGTCTTGGCAAAG13.125No Hit
TCTTTTGAGCTTGTGACCAAAAGGGGGCACGGGGGGAGTATTGTACTGTA13.125No Hit
ACTGAGCCACCCAGGCTAAGTGTCCTTTTCCACTTGCTGTGGGCACTCCC13.125No Hit
GGTCATCGTATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCA13.125No Hit
TTCATAGACTGTTTAAAATACAGTTGGGCTGAGGCCGCTTCTACTGAGAA13.125No Hit
AGTTAGCCGGGGGGTGGTGGTTGTTGAGGGAGCCACGTGGGCTGTGTTTA13.125No Hit
GAGGTAGCACTGATTTTCAGAGTGGAGCCATTACCCAGTAGAGGATCAAG13.125No Hit
AGAAAAGGACAGGGCTGACTACATAACCACCCGAATCTGCTGCCGAGGCA13.125No Hit
GAAGTTAGTTTGGTCAACAATGGTAATTTTTAAATGTTTAGATACTTGAG13.125No Hit
GCTTCAATCCAATGATTGTCGAGCTTGCGGAAAAGACAATTAAGGAATAT13.125No Hit
TCCTAACACTCACTCAGTTTTGCCAATTCCCGGTTTGCTTAAGCAGGCCC13.125No Hit
CGGGGCCTACCCCGCCCTGGACTCCGCACGGCGGCGCGCGCTGTGGTCGA13.125No Hit
TCACTAGGGCACCAACTACTTCCTACACAGTAAAGCGTCAACAGGATAGT13.125No Hit
ATACAGATGACTGTGCTTTTTAAAGTAACAGACTCTGAACTCCAATGTTG13.125No Hit
ATTCTAATACATGGTTTTCACTGTTGGAAAGAAAGAAGTACATGCGTTTC13.125No Hit
CTTTATTACTGGGTAGAAAGAACACTTGGTCCTGATTTCTCAATTCCTCA13.125No Hit
GCAAATCCTACATTAATGATAAAGGGAAAGAAGTCCTCGTGCTATGGGGC13.125No Hit
CTCATTAGCTGAGTGTGCCAGGGAGCGGGAACAGTGTGGCTTGGGCAATT13.125No Hit
TTGTGGAAACACCTAGTTCAGACAATGGAACGTGTTACCCAGGAGATTTC13.125No Hit
CCTTACAGACAGTGACTACATCCTGTGTCCCTTGGCGTCACCAGTTTTAA13.125No Hit
GGATGCAGAGAGGGGCGACAACAATCATGCTGGGCGGCCACACTACAGCT13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)