FastQCFastQC Report
Mon 10 May 2021
HGJM2BGXJ_n01_ReSeq_Blank_Well2_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGJM2BGXJ_n01_ReSeq_Blank_Well2_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCACCATTGCATCCCTGAAATACATCTTACTGGATCATACCTCT11.694915254237288No Hit
ATTCAATTCCATTCCATTTGATTCCATTCCACTCGGTTTCATTCCATTTG11.694915254237288No Hit
CTCCAGGACTCAGGGAGTGATTGGGTGTAGGGAGTGAAAGAATAAAATTC11.694915254237288No Hit
AGACTTGACATCATATGTGATAATGCGACTTTAGGAACATTTCCATTAAA11.694915254237288No Hit
GTAAATGGCACAGCCATCTGGTTCATACCATAGCCACTGGGTCAGCCAGC11.694915254237288No Hit
TTCCGAATGTGTGTGGATTATAGAGAGCTCAATAAGATCACAGTCAAGGA11.694915254237288No Hit
GAAGTACTCTGAGATGGCATGATGATTCCTGTTTGAGGAACACTCTACTT11.694915254237288No Hit
TACCTGAACCTGCTTGCCATCTGGACACTCCACCAGGGATGCTGGTCCTT11.694915254237288No Hit
TTCCAACCTTGTCCATCAGCCGTCTCTCTCTCTAGGCAATGCCACATCCT11.694915254237288No Hit
TCATGGGAGACTTGCTCTTTTTCCTCCTACAGGATGTCCGGAGAGTGTAC11.694915254237288No Hit
ATACTGACGAGTTGGAGCCCCATTCAGAGCAAAGCACATCAAGATTCTTT11.694915254237288No Hit
GAAACAGAGAGTACCAGGACATAAATTTGCCTAACAACATAGTGTGAGCT11.694915254237288No Hit
CGTATGGTCTATCGAAATATACATGAGTTTAATAGGCATTAGCGTAATTG11.694915254237288No Hit
GGGGCCTAGGCGGAGGCCAGGGGCGTCGGCTGTCCAGGTCGGCGGCGACC11.694915254237288No Hit
CTTGTTGTGTCTCTCTCTGTCAAATAAATAAATAAATAAAATCTTTTTAT11.694915254237288No Hit
TGGTCGGACAGGAAAAATAAGAAAACAGAGAATTTCAGATGGATTGTCGG11.694915254237288No Hit
ACAGGAGGTCATGCGCAATGCCTCAGAATCCATCTTACCCCTGGACAGGC11.694915254237288No Hit
GTGCCTACGGCGTGTTCTTCGGCTCCATCTGGGTGCTCTCCAGCGTGATG11.694915254237288No Hit
GATCAGGATCACAGAGCTCCACCGCCTAATAGACTAGCCTAAACGCCTAA11.694915254237288No Hit
AACACAGGCTGGGAAAGAAAACTCCTCGTCCACAGACCTGATGGGAGTAC11.694915254237288No Hit
TTCCAAAAGTGTAGTTGTCATTACTATCAGAGGCCACAGAGAACTGCAAT11.694915254237288No Hit
GGCACTTCTCAGACCTTTCACTCAACATAAACTTTACTTTTCAGCAAATC11.694915254237288No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG11.694915254237288No Hit
ATATATCATCTTCTCTCTGCCTCGTGGCTTACTAAGTGATGAGCGCATTT11.694915254237288No Hit
TCCTTGACCATACTTTTTAAATTTCAGAGTACTTAGTACCAATAGCAGTG11.694915254237288No Hit
TCCATGCAGGTGCAGCTGGGGAACGGGAAGCAGAGCCGATCACTGGAATC11.694915254237288No Hit
CATTTAGACAGTACATTTCCTAGCCTCACTTAACAACTAGAAGAAGATAG11.694915254237288No Hit
ATGTGTAGCAGCATTCTGAACCTGTGTCGCACTAGATGGCAGTAGCCACC11.694915254237288No Hit
GTTCTTGGGGAGCCGCCGGTCTGACAGCCTGTTGAAGTTCAGGCGAATGA11.694915254237288No Hit
GTCCTGCTGTACCTGTTTGCAGTTCCTGCAGGGTAGAGACCACAACAATA11.694915254237288No Hit
GTAGTAGACTCCCCTCTGTGAGTTCCTGCCCTCTTGGTCTTTCTTCAGCC11.694915254237288No Hit
GTCCCGCAGAGGCAGTCTTAGGGACAGTGACAGCCTCCAGCGGGGAAAGG11.694915254237288No Hit
GTATTTGGAATCTTTTCTCCTTTACCTAGCGGGTAGCGTGAGCTTGGCTC11.694915254237288No Hit
GGCAAAGACCCTACCAAAAAGGAGAATTTCAGACCAAAATCTCTGATGAA11.694915254237288No Hit
TCTTACACCTAATATGGAAATAATAATAGTACCTACCTCTTAGGGTTCTT11.694915254237288No Hit
CTGCATGAGGTCCCTTGTCAGCACGGGGAGCCCCTTTCTCTCTCTTCTAC11.694915254237288No Hit
CATGCAGGAGGCCCCGCACGGGCGACTTCCAAAAGGAATGTTCTGGAACG11.694915254237288No Hit
CCTTAAAAGAGAAGAGGGATTGAGCAAGGAAGAGAAGAAAAAAACTCGGT11.694915254237288No Hit
TATTAGACCCAGGTGACAGTCCTGAGATCTAAATTGTTGTGTTTCTATGC11.694915254237288No Hit
GTCCCAGGGCCGCCCACTCGGTCTCCCTCCCTCGGGGGCCGCCACAGCAC11.694915254237288No Hit
TGGCAAAGCAAACAGAAGGACAGAGGCGGCAGGAAGTACGAGAAAGACAG11.694915254237288No Hit
GGCCGTCTGCTCAGTGACGGCTGTCTAATTACCTGGACATCCACTACAGC11.694915254237288No Hit
GGATTTGTATGGGGAGAAATAATGGAGAGGATTTTATGCATCAGCGAGGC11.694915254237288No Hit
CCTTTAAGGAGCAAGGGCCCTCCCTTTGTTTCTATACAGTTTTGGAATAC11.694915254237288No Hit
AATGCAACCAGCTTTACAAAAACAGATGGTGTATGCCCTGGCTAATTAGA11.694915254237288No Hit
CTCACAAACCGACACACCAACACACACAATCACTCAAGATCCCGTAACAC11.694915254237288No Hit
GGTTCCGGGTGAGTACAACAGCCAGCTTCTGGTGGGTGGGAATACCTGGT11.694915254237288No Hit
AATTAGATATCACAGGGAGAATCTCATTGCCTAAATAAAACTGTCTTTTG11.694915254237288No Hit
GCACAGACTCTGGAACCAGGCTGCCTGGGTTTGTATCACAGTTTTTATCA11.694915254237288No Hit
GTCTGATGGCTGTCGCGCGATTCACTGCTGTTGGCGGTGGACTACTTTAC11.694915254237288No Hit
TTGTGTGCTACCATAAAGCCGTCATATGTGGTTCCCACTGTATTCTTTCC11.694915254237288No Hit
ATAATACAGAAGTATCCTTGTGACTGACGATTGTTATCCTCTCACCCTGA11.694915254237288No Hit
CAGTATATCTGAGGAGGTTAATACAATACTTAACAGACTCAGGAAGGTAC11.694915254237288No Hit
CATGAGGACAGACTGCAGGAGGCCTGGGACTACGTGCAGGCCCAGGTGAA11.694915254237288No Hit
GACTATGTTCAAGTCAAGAAGAAGAGGGATGGACAGGACCAGAAAGCCCT11.694915254237288No Hit
CCTGTGGAAGGTGCACTTTCCTCATTCCGACTTTGTTTTTCCTACCTACA11.694915254237288No Hit
CTCCTGAAGGCACGCGCCTCCCCGTTCAGACAGTATCCTCACCCCCGGCC11.694915254237288No Hit
GGGTGGAACAAATAGCTATTCACAGCTTCACAGAGGCACCAAGCAAGACA11.694915254237288No Hit
CGAATGGCTTATTAGGGGAACTTAACAGAAGCAAGTCTTGGGCTTTTCAA11.694915254237288No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)