FastQCFastQC Report
Mon 10 May 2021
HGJM2BGXJ_n01_ReSeq_Blank_Well1_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGJM2BGXJ_n01_ReSeq_Blank_Well1_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCCAGATGGCCCGCTTAGGACCCTAAGGCACAAGTCTCCTAACATCCC11.4084507042253522No Hit
GGATGGATCAAAGTAAAAGGTATCTGAGATATGACCAAAGGTAACCGAAG11.4084507042253522No Hit
GATGAGTAGGCGATATGTGAATTATAATTTAGGCCTTAGCTGAAATGGTC11.4084507042253522No Hit
CAATTAGTGAAGCTTGCAAATGGTTTATAATAATAATAATAATAATAATC11.4084507042253522No Hit
GCCTAAGGCAATCTCTAGATAGTAGCCTGGGATTCAGACCCAGATTTGTT11.4084507042253522No Hit
GCTCAGGAAAGCCTGACTGGGAGGCCGTTTCTGTCATGGGGTTGGGAAGG11.4084507042253522No Hit
TTACTACTTCTTGTTTCATCCTCTCTCTCACTTAAATCAGTCTTAACTGG11.4084507042253522No Hit
GGCCACCCCTCCGATATAAAGGCCTGAACCTGCTGTTCGACCCACTGAAA11.4084507042253522No Hit
CCTCAATGAAGGGTACTCAATTCAGTAAAGACTTTTGGGAGTCACAGCTC11.4084507042253522No Hit
ATCAGCAAATTGATTGTACACAAGTTCAAGAGGTTTAGGCATGATGACTT11.4084507042253522No Hit
GAGTAAATAGTAGCTAAGGATACTACTGTTGTAACAGGCAGCGAGTGCAG11.4084507042253522No Hit
CCACCACAGAGAGGACGAAGGGAACAACACCCATTTGTGTGGTCCCCATG11.4084507042253522No Hit
CAGCTGGCCTTGGGCCACTGAGGCCAAGATGAGGAGAAGTGGGAGGAGCC11.4084507042253522No Hit
CTACTGAGGTGAGAAGAGCCAACGATAGATTCAACCTACCGCTGCAGGTG11.4084507042253522No Hit
CTTAAGAGCTGAATGCCAAAATCTTACTGTGAGATGCTAAATACATCTCT11.4084507042253522No Hit
GGTGAGGGATCGGGAAAGAAACTCATGCGGCCTATGCTGCGCTTGGAGAA11.4084507042253522No Hit
GAGCAAAGTGAGTCTCCTGTGGCACAAGCAGCGTCATACGTGTGCGACTT11.4084507042253522No Hit
GGCTGTTATTTCTTCTCTCTCATTTGTGATTTTATTTATTTTTGATAAGT11.4084507042253522No Hit
CTTCCTACCCTAATTCATATTTAGGTTTCCCCGGAAGACACAGCCGCATT11.4084507042253522No Hit
TGACAGCTATGTGGAATGATTTGAGGGATAACAGTAATGTCCCAAAGGTT11.4084507042253522No Hit
TTCTGGTCCTGCATTAAAACTTGAATATGTAGGGCATTTTTCAAGGATTC11.4084507042253522No Hit
GAGCAGGGGAGTGCTTAGATCATGGCTGCAGAACTAACAGATGATGTTCT11.4084507042253522No Hit
GTAGAGAAGAGGAGGTCATTATTGGTTAGAAAAGTGATGGTAATTTTCGA11.4084507042253522No Hit
GAGCACAAGTGCTAACTGGTCTGTCCGTCTGTCCAATAACAGCACACCAC11.4084507042253522No Hit
GTAAAGGCTGGCACAGTGCAGCCTGCAACACTTGCCGGCCACAGAGCATC11.4084507042253522No Hit
ATTATGAGGATGGGTTTTCTGTTATATTCTGATGCCGACTGAGTAAGAAT11.4084507042253522No Hit
ATGCATAGGTGGTAGGGTGCAATTTAACTCGCTCTACAACTTCCTTCTTC11.4084507042253522No Hit
TTTGGGTCCATGGAGACCTTGAAACTGGGCGGGGGCGCCGGTTCCATGTA11.4084507042253522No Hit
TCATAGAGGAGACAGGTATGGCATATCTCGTTATAGTGAGATGTGATAAC11.4084507042253522No Hit
TCTCTCTCTCTGCCTGCCTCTCCATCTACTTGTGATTTCTCTCTGTCAAA11.4084507042253522No Hit
AATATAGACAGTGGATATTCCACCAAAGAAGGTGATAGTTGGTAGTAGGT11.4084507042253522No Hit
TTGTCGGGGCTGCTGCCGCTGGGAAGGGCCAGGATTCAGAACCCCGCCCG11.4084507042253522No Hit
GTAGTTTCCAGTTAACTCCAATCCAGTGATTACTCTTTGGGAACAAATTA11.4084507042253522No Hit
GTATAAATATATACTTAATACTTAGAAAAACTATTAATTTTATTATAAAA11.4084507042253522No Hit
CAAAGATATTATCTTACATGAGCACTGGACAATTATCAAACCCAGAAAAT11.4084507042253522No Hit
GGTAATTCTGGTATTTGCTGGTTTATGGAACAACAGACAGAATATTTGAA11.4084507042253522No Hit
CGCAGATGCCCGTGGTCTCAGCGTCACTTCACTGCAGTATAAAGTCCCGC11.4084507042253522No Hit
AACTCACACAGTAAGAAAGCCAACCCTGTATTTTAGGTTCATATCCCAGG11.4084507042253522No Hit
GCTTGAGGCTGTTCATTGATCTCCTGTTCTTCGGTTCCCTCCCCCTCCCA11.4084507042253522No Hit
GATTTTTTGAAGGGTTTTTTGTGTCTCTATCTCCTTCAGTTCTGCTCTGA11.4084507042253522No Hit
GGCGTACCTTATCCACTGGATAAGTCTGGACCCGGGAAGACACTGAAGAG11.4084507042253522No Hit
GTTACTATCTGCACATTTGAGGGAAAGTTATTTAAGTCCTCAAGCCTCAG11.4084507042253522No Hit
CCAGGACCCTCCATTTCTGTAAATCACAGAATCTGGGCTTGAAGGGTGGA11.4084507042253522No Hit
AAAGTAGACAGGTTGAGCATTGTAATGTGTGACTTTGGAAACAAGATTCT11.4084507042253522No Hit
GAATTATCCACAGGATGTGTAGCAGTTGCTACTGGAGACAGGATCAATGA11.4084507042253522No Hit
GCACAATACCTATTTGACCTCATTAAGAAAAATTGCCACTGTGGGTCGGC11.4084507042253522No Hit
ATGCTTTACATGTATCTTCTTCTTCTTGTGAAATCCCCCAAAAGATCCCA11.4084507042253522No Hit
CCATCGGCGTCCGCATCGAGCACGGCACCCCGACCGAGGTCGTCACCGCC11.4084507042253522No Hit
CCATTGTAATGTTGCCCAATATCAAGGAAGTATAATGGAGAGAATTTGGT11.4084507042253522No Hit
GTATTTATATGGCGCTGATAAATCACCCTCTGTGAACTTATGTTTCAAAC11.4084507042253522No Hit
CTGTGGATGACCTAAGATGATGGTAGAGTAGGCCAACTGATAAAAACGTC11.4084507042253522No Hit
GTCTGTGCACGCACATGATTTTACACTTCACTTTTACCTTTCAATTTTGT11.4084507042253522No Hit
GAAGAGCGAGTCACTCGATATGACTTCAGCTGTAATTTAATTTACCTTAT11.4084507042253522No Hit
CCAGGCATCCCTCCAATCTTCTTTTAAATACAAGTATCGGCAACTCAGAT11.4084507042253522No Hit
GTGAGTAGAATCACTTGGAATTATTTCAGAATTCAGGGATTGAAACACCT11.4084507042253522No Hit
ACCCAGGTGTCCCCAAATACATAAAATCTTAAAAGCAATAACAACGAGAA11.4084507042253522No Hit
GGTGAAAGGTGACGACGTCCAAGCTCTTTAGTACATCGGGGTGTACGCAG11.4084507042253522No Hit
AGAGGGGACCCATCACCAGTATCTGGCACATGGGAAGGGCTCAGTAAATA11.4084507042253522No Hit
CAGAGAGGCAGGCAGAGAGACAGAGGAAGGGGAAGCATGCTCCACGCCGA11.4084507042253522No Hit
CCATAAACCAGCTAATACCAGAATTACCAGCACCTAGGTAGCCAAACCAC11.4084507042253522No Hit
TTCCAGTGTTTAGCCCACTTACCAATAAAGCCAGTGGTGTTGCGTCAACC11.4084507042253522No Hit
ATATCAGAGAGGATGTGGCAGCAGTTCTTGGCCACCAGTGTCTTGACAAA11.4084507042253522No Hit
GAGACGACTATTCGCTTATTAGATGGCTCTAGCCTGTTAGCCCTGGAAGA11.4084507042253522No Hit
CAACTAGATAATGCATAAAGTCTGTGTTAGTGATTACAAATTGGTATGCC11.4084507042253522No Hit
GCACTGAGCAACGCGTGCCTGCCAGTCCATCGGCTCCAACAGGTTGATGA11.4084507042253522No Hit
GCAAAAGCAGGGGCGGACACAAGACGGGAGCGTGTCTACAGCATTTTGCG11.4084507042253522No Hit
GTTCATTATTCCTTCCTTCTTGAAACACTCTTTTCTTAGCTCTAGGGTAA11.4084507042253522No Hit
GGACCACGCTCCGACCGGCCGGAAGCGGATGGGTCGTCGTGCTGCCGGAG11.4084507042253522No Hit
GCTTAAATGATTAATTAAAGGACAGGTTAAAAAAGCTGTTGAAATAATTA11.4084507042253522No Hit
GGATGAGCTTTCCGATGATCACGTTCTCCTTCAGGCCACGCAGGCTGTCG11.4084507042253522No Hit
TGGGAAGGCTTAACTTAATTCTGGATAAAAACCAAACAAATTAAACAATT11.4084507042253522No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)