FastQCFastQC Report
Mon 10 May 2021
HGJM2BGXJ_n01_ReSeq_2869_d10_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGJM2BGXJ_n01_ReSeq_2869_d10_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAGGACTGTCCCTGGAAGTGCGTGACTTGGTGCACGAACAGGCTTGT11.2345679012345678No Hit
GAGGCAGAGGGAGAAGCAGACTCCCCGCTGAGCAGAGGGCCAGATGCAGG11.2345679012345678No Hit
GCTTTAAATCAAAGCTTAATGACGATTGAAGTATTTTTATAGAGTTACAG11.2345679012345678No Hit
GTATGAGGGTTTGTGAGACATAGGCAAAGGGAGTTATCTAACGGCGGCAG11.2345679012345678No Hit
GCCCCGCATCGGGCTCTCTACTCAGCAGGGAGCCTGCTTCCCCTCTGTCT11.2345679012345678No Hit
GGTCTGGTTTTTGTGCCCCACCTCAGCATTCCGTCCGGGCACAGCCCATA11.2345679012345678No Hit
ATATGTTGGCCAGTGGTTTCTACAAGTTTCTGGTCTACAACATCAAAAAG11.2345679012345678No Hit
CCTCCAAGCCGTGCTGTCTCAGCAGAGTCAGGCCAGTTCGAGGGACAAAG11.2345679012345678No Hit
GTGGGTGAAGAGGCCGGAGAGGGGCTGGGTCCCCATGCAGAAGGACAGGC11.2345679012345678No Hit
CATAACTACTTACCAGCCTTCAAGGTTTATTTGGATTTTAATAGTTTTTT11.2345679012345678No Hit
CTGTTATTATTAACATATGTCGAAGTTATTCAATTAACCTGATTATCTCT11.2345679012345678No Hit
CTAGAACAGAATAAAACATGAAGCCCACAGTGTCACTCTTCTGCTCAGAG11.2345679012345678No Hit
ACCCAGGTGCCCCCAAATCCCTGACTTTAACTGCAGTGTTTAGTCTATTC11.2345679012345678No Hit
CCTACTAAGATTGAATTCTAAAGAAACAGACATCTGACTGTTCAGCTGTC11.2345679012345678No Hit
TCCATGATGTGGCCTGAGGAAAAAGTAAGATACGGTAGATACAGAGAAAT11.2345679012345678No Hit
ACCCTGCATCATGACATCTTATTTTGAAAGACTGAAGGGGATTTTCACTT11.2345679012345678No Hit
GTTTGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGTGGGGGGGG11.2345679012345678No Hit
GCAAAACGAATATAATCCTCACAAGTGCCCCAAGAACGTAATACAACTTA11.2345679012345678No Hit
CCTCTGCAGTGGTAGGACGGTTTTTCATGGAGGAAGGGGCCCACAAAGGC11.2345679012345678No Hit
GATTAAATAAGATTATATTCATATAGTGCTTAGTTCAGTGTCTATGCTCA11.2345679012345678No Hit
GGCAAGTCACCTGAGAAATACTTTTACTACTATACCTTTAATCCAGGTCT11.2345679012345678No Hit
ATCCTAATGAGCTCCAAGAGGCCTCTTCAGAGCTAGCACAGCAGTTATAC11.2345679012345678No Hit
GATCCCAGGGTCCTAGGATTGAGCCCCGCATTGGGCTCTCTGCTCAGCGG11.2345679012345678No Hit
GTAGAATGTTGTTTAGTCTCTGTGTTTATGAATTTACAGTTTTATTCTTG11.2345679012345678No Hit
CCTATAATTTTCCCAAATGAGGACTGAAATCAAATCAACCATCTTTTCCA11.2345679012345678No Hit
GAATAATGGAAAAGCTAAAATCATATTTTACGGAGCTCACCTCCGATCCT11.2345679012345678No Hit
TTGTACAAGTGATGACATTTCCACAACATAAGAAATCTAGTTCAGGACTG11.2345679012345678No Hit
TTTTATGTGAAGGTGGCTCTTCAGTCTTCCCAGAGCATGGCTCACAGGCT11.2345679012345678No Hit
CTTAACGACTGAGCCCCCCAGGCACCCCTAAACACACACGTCTACGTACA11.2345679012345678No Hit
GTTGAAACCTGGACATCTTGGGTATTATGTTCTGTGAGTCTGGACCTAAT11.2345679012345678No Hit
GTCCTCCTTCCTGACCTTGGGCGCTGTTCCTAGCACTGTGGGTATGCTGG11.2345679012345678No Hit
CTCTTATTGCTGTGGGATAATACATATTGCATATAATCTTACTCTGTCAA11.2345679012345678No Hit
GTGCGTCCACGTGGAGGCATTATGTGTTTTACCTCGCCCTCCCGCTCTGT11.2345679012345678No Hit
GTCAGTTTGTCTCTCTCTCCAGCTCTGTGTCAAATAAATAAATGACATCT11.2345679012345678No Hit
ACTCTACTAAGATATGAAATACTCTTGTCATTCTAGAAAGTTCCTTTCCC11.2345679012345678No Hit
GGGTGGCACAGTCAGTTAGGCAGCTGACTCTTGATTTTGGCTCAAATCAA11.2345679012345678No Hit
TACTGCATTCTGTGAGTTTTGTTTCATTGTATTATTTTTTCATTTACCTC11.2345679012345678No Hit
GCTCCATCCCAGGACCCTGAGATCATGACCTGAGCCGAAGGCAGAAGCTT11.2345679012345678No Hit
CCCGAGGACTGGCTACTAAGGTGTGCCAATCAGGGCTTGGATCAGGTCCC11.2345679012345678No Hit
GCGCATTCTTGAGTGCGGGAACGGAGCTAGTATGGCAGGTGGCTTGAACC11.2345679012345678No Hit
TTCCTCACGTCCTCCCACCACAAGCAAATCTGTCACCAGTCACAAGGACG11.2345679012345678No Hit
GATTCCAGGAGTGCGTGGGGCCTCTCCTGGCAAAGGAACAGTTTCCCTCT11.2345679012345678No Hit
CTATGGAGGTGAGGGGTGTGGTGGCAATGGAGGTGTGCCCCTCAGATTTC11.2345679012345678No Hit
TGGAGTTCCTTTAGGTGGCCAGTCAGGTGCTGTGTCCCACATACCCGATC11.2345679012345678No Hit
TGAACAGACTAATGACCAGTAGAGAGATTAAATAAGAAATCAAAAACTTC11.2345679012345678No Hit
CAATAGTTGTAAGGCTTGCATAAAGGTTATTTGCTCAAAGCTATTCTCTG11.2345679012345678No Hit
GTATTGTGAGGTGCTATGGTAAATAATGGCAAATCATTTGCAACTTAACA11.2345679012345678No Hit
AGCAAAAGCAGGTTGGAGATGTTGAAGGAGTTCTTGGGGAGCCCCCGGTC11.2345679012345678No Hit
GCAAAAGCAGGAGAGAGTTTGATAAATTTTCCTCAGTACTTATTTTTCAG11.2345679012345678No Hit
GTCATATGTAAGGCCACAAGCCAAGTCAATAAAGTCCAGAAGCCTAGCGT11.2345679012345678No Hit
CCCCCAGATAGTTATTTTTAGATATGCATTTTTATATTAAGTACAGTGGA11.2345679012345678No Hit
GTTCTCCCTGAGACTTAGAGTCTCCTGAAGGAACGTTGAAGACGACGACG11.2345679012345678No Hit
AATCTAGGCTTCTGGAAATTATTGACTTGTCTTGTGGCCTTACATATGAC11.2345679012345678No Hit
TCCTGGGCACAGGCGCAGTACAGGGGGAGCTCAGTTTAGCTACCAAGGTC11.2345679012345678No Hit
CTTTATTTTTCCTTTATTGATTATCTGCCTTTCTGAGGCAGCGTTCTACC11.2345679012345678No Hit
CCAAGAGCACCCCCGCACCCCCACACCCTCTGTGACGATGAACCACGGCT11.2345679012345678No Hit
GCACAAAGAGCAATGATGGATCAGGTGCGAGAAAGCAGAAATCCTGGGAA11.2345679012345678No Hit
GTAATCATTTTACTGATTTCTATGTTCATTGGCTTTTGGTCCATCTTCCC11.2345679012345678No Hit
GAGCAAAAGCAGCCCACAGAACCCTCTCTGATTTCCCAGCGACTGCTATG11.2345679012345678No Hit
CATATCAACAAAGAGCTGGTTCTTTGAAAAGAACAAAGCTGACAGAGTCT11.2345679012345678No Hit
CTCTATTTTAGACTGGCCATAAATGATCAATCAAAAATATTTTTATACAG11.2345679012345678No Hit
GGACTGCTCATATCTCTGTTCTTCTGAGCCTTGCTGCTTGGCAGACTCCT11.2345679012345678No Hit
CTCAGAGAGATTGAATGTAATTATCTTAGTAATAAAAATATTAACTGTTG11.2345679012345678No Hit
AATTTGATTCCTTTCAGCTTTGCTTCCTGTGGGGTGTGGGTCAGGCTGTA11.2345679012345678No Hit
TTCCCAGCCTGTGAGCCATTCTCTGGGAAGACTGAAGAGCCACCTTCACA11.2345679012345678No Hit
TAGTCGATTAGTCTAGTCGATTAGTCAGTGGAGCTCTGTGACTCCTGATC11.2345679012345678No Hit
GTCCCAGCAGAGAGCTGCTGGACTGGAGGGAAGATCCAGGGAAGCTTATT11.2345679012345678No Hit
GAAAAAAAATGGGAGGTGAGTCGTGGTGTCCGAAACCACACAGACAGATT11.2345679012345678No Hit
CTATAAAATCCCCTCTTTGATAAGTTCTGTATCAATTTTAATTGATAACC11.2345679012345678No Hit
CTCCCCGCTGAGCAGAGAGCCTGACTCGGGGCTCAGTTCCCAGGAACCTG11.2345679012345678No Hit
CATCTGACTGTTCAGCTGTCTACTAATGACCAGTAGAGAGATTAAATAAG11.2345679012345678No Hit
CTCTCCCTCTGACCCTTCCTTCTCTAGTGTATGATTGTGCACTCTCTTTC11.2345679012345678No Hit
ATCTGACTATGTGCACAAGATGATGTCACTGAATGGTCTTCGCGTGTGCT11.2345679012345678No Hit
GCTAAACAAGGACCCTGATTCGGGGCTTGATCCCAGGACTTTGGAATCAT11.2345679012345678No Hit
CCATGATACTGAACAACCAATTGGGTTCGTGGGCAACCAAAACTAGCAAC11.2345679012345678No Hit
ACACAGAGCATGACTAAGAACAGGAGAGGTAAAGGGCACGTTCTTTATGA11.2345679012345678No Hit
CCCCCGGTAATAACATGGAGATGCCCCGTCCTCTACACTTATGAGAAATT11.2345679012345678No Hit
AAAGTAAACATTTCTCAAAAACTGGATCCAGGATGAGCGCTATAGTTACA11.2345679012345678No Hit
AACCCAATGAGCACAGGAATTTGTTTTTCTTTACTGCAGCATCCCAGCAC11.2345679012345678No Hit
ACAGCGGACTGTGACACCAGCCAGCCGGGTGACAAAGGCCTGACACAGGA11.2345679012345678No Hit
TTGCCACCGTGACTGGACCCCTCCGTGGCTGGAAGAGGTAGAGGAGAAAG11.2345679012345678No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)