FastQCFastQC Report
Mon 10 May 2021
HGJM2BGXJ_n01_ReSeq_2232_d04_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGJM2BGXJ_n01_ReSeq_2232_d04_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCAAGGGATTGGTTAATGCTCATTCCCAAGCAGAAAGTGACAGGGCCC14.545454545454546No Hit
GGCACCAAACGATCCTATGAACAGAGGGAAACTGGTGGAGAACGCCAGAA14.545454545454546No Hit
TGTGACTAGTGTCTGAAGTGCAGTGAGGAGCAGTCTTGTAGGACTGAATC14.545454545454546No Hit
GTGTCTTTTCATCTAATTTGGAAAATTTTAGCAATTCTTCAAATATTTTC14.545454545454546No Hit
GTCACTATCTGCTGAAACGGGCACTGTTGACAAGAGGTCCCAACAGTCAT14.545454545454546No Hit
CAGTAAGTATGCTAGAGTCCCGGTTGACTTTATGTTAAAACACTCTTATG14.545454545454546No Hit
ACGCTATGAGGACAATTGGGACTCACCCTAGTTACACTGCAGGTATAAAA14.545454545454546No Hit
CCTGGTGACCCAAATGGGCGCTGCGCAAAAGTAACTTTTCCGACTGTAAG14.545454545454546No Hit
CTATATTACTAAATGAGCAGTATGTGTAAACCTCCTGGAGGTATTTGCAT14.545454545454546No Hit
GCTTGGCCCAGGTCATTCAGGTCAGTCAGATTCACCGATTCCTAGAGAAG14.545454545454546No Hit
TTGACAGGGAGCCTGCTTCTCTCTCTCTCTCTCTCTGCCAGCCTCTCTCC14.545454545454546No Hit
CCAGAACAGGAACAATGATCCTGATTTTAGATATTGCCACCGTTAGGGGG14.545454545454546No Hit
GTGTCAACTGCCACAACAGTCGTGGCAACTCAGGTAGGGCGCCGGGGCCA14.545454545454546No Hit
GCATATAGTCGAGTTCGGTTCCCACAACCGGCGGTGCGTTAAATGGAATC14.545454545454546No Hit
CATTCAAGTCCTCCGATGAGGACCACAATTGCTTGTTTGTCATCCTCGTC14.545454545454546No Hit
CAGGACCTGAGCTGATGGCCAATACTTAACCCTCTGAGCCACCCAAGAAC14.545454545454546No Hit
CTAAACAGTATGATCCATGTTTTGGTGAGCTCTTAGAACAACACAGAGAA14.545454545454546No Hit
TCCTTTTGTGAATGTGGCACATTAGTTTGATTTGTGGATGTTGAACTGCC14.545454545454546No Hit
TCCCCCAATTACCTGGCTCCAAGAATGTACTCATGTGAGAATGAATCTTG14.545454545454546No Hit
CAATAGGAGAACCAAAAATATGAAAGAACTGAATATAACTTCTAGGACTA14.545454545454546No Hit
GTGTTTTTCCTGCTCCAGTAAACAAGCATCCATCCTCCTGTCATGGACGG14.545454545454546No Hit
TAAAAGCCAGCGCAAAATCCAATAAGTACCAAATTCACTTATACTCGTGA14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)