HGJJWBCXY_l02n01_transplanta2_02.351000000834ab.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGJJWBCXY_l02n01_transplanta2_02.351000000834ab.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6026700
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	21812	0.36192277697579106	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	10885	0.1806129390877263	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAG	8867	0.1471286110143196	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAG	7777	0.12904242786267775	No Hit
TTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAA	7508	0.1245789569747955	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	6490	0.10768745748087677	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	1125	31.599564	44
GCACACG	1215	31.112745	11
GTACTCT	2410	30.529383	3
ACGTCTG	1295	29.364235	15
TCGTATG	1235	29.149395	43
CTCGTAT	1310	27.652288	42
GTATGCC	1290	27.557758	45
TAGTTGT	2670	27.473354	9
TCTAGTT	2705	27.448105	7
CCGATGT	1335	26.96525	33
TACTCTA	2760	26.576382	4
CACGTCT	1455	26.444687	14
CGATGTA	1345	26.430422	34
AGCACAC	1450	26.380697	10
TGTACTC	3035	24.465664	2
CACACGT	1560	24.37628	12
TGTTACC	2995	24.19159	13
CTAATGC	2940	24.183138	21
CTCTAGT	3455	23.703857	6
TTTTTCC	4760	23.025562	1