HGJJWBCXY_l01n01_transplanta1_23.3510000008373e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGJJWBCXY_l01n01_transplanta1_23.3510000008373e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17388790
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	35319	0.20311361515091045	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTAGCATCTCGTATGCC	30275	0.1741064214358791	TruSeq Adapter, Index 22 (97% over 37bp)
CTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGCAAGGAAG	22124	0.12723139447885679	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTAT	21350	0.12278025095478179	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	20464	0.117685014310944	No Hit
CCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTATAA	18469	0.10621210561516932	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	4140	35.1628	44
GCACACG	4350	34.39671	11
ACGTCTG	4560	32.81218	15
GTATGCC	4475	32.429943	45
TCGTATG	4555	31.959166	43
AGTCACG	4625	31.426992	28
CACACGT	4880	30.890823	12
GTCACGG	4830	30.139715	29
CTCGTAT	4910	29.740122	42
GGTAGCA	4935	29.499376	34
CACGTCT	5120	29.135458	14
AGCACAC	5500	27.613762	10
GTAGCAT	5310	27.458466	35
CGGTAGC	5425	26.75043	33
CATCTCG	5615	26.16724	39
ACGGTAG	5880	24.757624	32
TCCAGTC	6290	24.001736	25
TCGGAAG	6210	23.984997	3
ACACGTC	6250	23.97549	13
GAGCACA	6560	23.665995	9