Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HGJHJBGXM_n01_3690_1_IL HGJHJBGXM_n01_3690_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 18430597.0 0.0 101.0 44.0 27.908784496862072 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n01_3690_2_IDT HGJHJBGXM_n01_3690_2_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 6469536.0 0.0 101.0 49.0 20.767705644995438 101.0 pass pass pass pass fail fail pass pass fail warn fail HGJHJBGXM_n01_3690_2_IL HGJHJBGXM_n01_3690_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10212303.0 0.0 101.0 44.0 34.14235229386724 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n01_3690_3_IL HGJHJBGXM_n01_3690_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 8662435.0 0.0 101.0 44.0 33.59432981481086 101.0 pass pass pass pass fail fail pass pass fail fail warn HGJHJBGXM_n01_CDC1080_1_IL HGJHJBGXM_n01_CDC1080_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 2860161.0 0.0 101.0 45.0 44.875115004320975 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n01_CDC1080_2_IL HGJHJBGXM_n01_CDC1080_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 14953735.0 0.0 101.0 45.0 27.877620154288728 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n01_CDC1080_3_IL HGJHJBGXM_n01_CDC1080_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 15900598.0 0.0 101.0 45.0 27.65757309659161 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n01_CDC888_1_IL HGJHJBGXM_n01_CDC888_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 12683512.0 0.0 101.0 47.0 25.222247106263673 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n01_CDC888_2_IL HGJHJBGXM_n01_CDC888_2_IL.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HGJHJBGXM_n01_CDC888_3_IL HGJHJBGXM_n01_CDC888_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 11069246.0 0.0 101.0 47.0 25.72105718710179 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n01_CDC944_1_IL HGJHJBGXM_n01_CDC944_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 8274079.0 0.0 101.0 45.0 30.152029769785198 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n01_CDC944_3_IL HGJHJBGXM_n01_CDC944_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 5066454.0 0.0 101.0 45.0 37.02420750236866 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n01_CHAR29_1_IL HGJHJBGXM_n01_CHAR29_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 784187.0 0.0 101.0 54.0 7.054312300509954 101.0 pass fail warn pass fail fail pass pass fail fail fail HGJHJBGXM_n01_CHAR29_2_IL HGJHJBGXM_n01_CHAR29_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 7454727.0 0.0 101.0 44.0 40.34537174779207 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n01_CHAR29_3_IDT HGJHJBGXM_n01_CHAR29_3_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 9560378.0 0.0 101.0 49.0 12.741834981355634 101.0 pass pass pass pass fail fail pass pass fail warn fail HGJHJBGXM_n01_CHAR29_3_IL HGJHJBGXM_n01_CHAR29_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 5947065.0 0.0 101.0 43.0 41.03743492688194 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n01_CHAR29_blank_IDT HGJHJBGXM_n01_CHAR29_blank_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 10598740.0 0.0 101.0 52.0 31.949685723494213 101.0 pass pass pass pass fail pass pass pass fail warn fail HGJHJBGXM_n01_CHAR29_blank_IL HGJHJBGXM_n01_CHAR29_blank_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10490586.0 0.0 101.0 44.0 35.21503038655361 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n01_CHAR30_1_IDT HGJHJBGXM_n01_CHAR30_1_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 8838541.0 0.0 101.0 49.0 16.041708269211817 101.0 pass pass pass pass fail fail pass pass fail warn fail HGJHJBGXM_n01_CHAR30_1_IL HGJHJBGXM_n01_CHAR30_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 6953131.0 0.0 101.0 42.0 45.321015771875395 101.0 pass pass pass pass fail warn pass pass fail fail fail HGJHJBGXM_n01_CHAR30_2_IL HGJHJBGXM_n01_CHAR30_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10602358.0 0.0 101.0 44.0 31.29686813558255 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n01_CHAR30_3_IL HGJHJBGXM_n01_CHAR30_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 8133766.0 0.0 101.0 44.0 34.904641673995926 101.0 pass pass pass pass fail fail pass pass fail fail warn HGJHJBGXM_n01_G3_1_IL HGJHJBGXM_n01_G3_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 9371557.0 0.0 101.0 44.0 31.17719920744327 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n01_G3_2_IL HGJHJBGXM_n01_G3_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 11246289.0 0.0 101.0 43.0 30.777212790616026 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n01_G3_3_IL HGJHJBGXM_n01_G3_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10245751.0 0.0 101.0 43.0 32.09908123843842 101.0 pass pass pass pass fail warn pass pass fail fail fail HGJHJBGXM_n01_undetermined HGJHJBGXM_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 39631630.0 0.0 101.0 45.0 17.23944882473212 101.0 pass pass pass pass fail fail pass pass fail fail pass HGJHJBGXM_n02_3690_1_IL HGJHJBGXM_n02_3690_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 18430597.0 0.0 101.0 44.0 29.101907848401336 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n02_3690_2_IDT HGJHJBGXM_n02_3690_2_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 6469536.0 0.0 101.0 49.0 53.67082130136945 101.0 pass pass pass pass fail warn pass pass warn warn fail HGJHJBGXM_n02_3690_2_IL HGJHJBGXM_n02_3690_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10212303.0 0.0 101.0 44.0 36.0592919429977 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n02_3690_3_IL HGJHJBGXM_n02_3690_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 8662435.0 0.0 101.0 44.0 33.352734547089256 101.0 pass pass pass pass fail fail pass pass fail fail warn HGJHJBGXM_n02_CDC1080_1_IL HGJHJBGXM_n02_CDC1080_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 2860161.0 0.0 101.0 45.0 46.047649163076635 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n02_CDC1080_2_IL HGJHJBGXM_n02_CDC1080_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 14953735.0 0.0 101.0 44.0 30.15671624109127 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n02_CDC1080_3_IL HGJHJBGXM_n02_CDC1080_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 15900598.0 0.0 101.0 44.0 30.266445349813388 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n02_CDC888_1_IL HGJHJBGXM_n02_CDC888_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 12683512.0 0.0 101.0 46.0 25.176466395483093 101.0 pass pass pass pass fail warn pass pass fail fail fail HGJHJBGXM_n02_CDC888_2_IL HGJHJBGXM_n02_CDC888_2_IL.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HGJHJBGXM_n02_CDC888_3_IL HGJHJBGXM_n02_CDC888_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 11069246.0 0.0 101.0 47.0 25.485140469331085 101.0 pass pass pass pass fail fail pass pass fail fail warn HGJHJBGXM_n02_CDC944_1_IL HGJHJBGXM_n02_CDC944_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 8274079.0 0.0 101.0 45.0 32.312246933584845 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n02_CDC944_3_IL HGJHJBGXM_n02_CDC944_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 5066454.0 0.0 101.0 44.0 37.92252763890267 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n02_CHAR29_1_IL HGJHJBGXM_n02_CHAR29_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 784187.0 0.0 101.0 53.0 7.407289332773943 101.0 pass fail warn pass fail fail pass pass fail fail fail HGJHJBGXM_n02_CHAR29_2_IL HGJHJBGXM_n02_CHAR29_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 7454727.0 0.0 101.0 44.0 44.21138082860525 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n02_CHAR29_3_IDT HGJHJBGXM_n02_CHAR29_3_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 9560378.0 0.0 101.0 48.0 49.543660838497466 101.0 pass pass pass pass fail warn pass pass fail warn fail HGJHJBGXM_n02_CHAR29_3_IL HGJHJBGXM_n02_CHAR29_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 5947065.0 0.0 101.0 43.0 44.36638906977398 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n02_CHAR29_blank_IDT HGJHJBGXM_n02_CHAR29_blank_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 10598740.0 0.0 101.0 50.0 34.28512983544597 101.0 pass pass pass pass fail fail pass pass fail warn fail HGJHJBGXM_n02_CHAR29_blank_IL HGJHJBGXM_n02_CHAR29_blank_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10490586.0 0.0 101.0 44.0 36.18051461944479 101.0 pass pass pass pass fail fail pass pass fail pass pass HGJHJBGXM_n02_CHAR30_1_IDT HGJHJBGXM_n02_CHAR30_1_IDT.fastq.gz Conventional base calls Sanger / Illumina 1.9 8838541.0 0.0 101.0 48.0 49.967986199655634 101.0 pass pass pass pass fail warn pass pass fail warn fail HGJHJBGXM_n02_CHAR30_1_IL HGJHJBGXM_n02_CHAR30_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 6953131.0 0.0 101.0 42.0 47.27547007122111 101.0 pass pass pass pass fail fail pass pass fail fail fail HGJHJBGXM_n02_CHAR30_2_IL HGJHJBGXM_n02_CHAR30_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10602358.0 0.0 101.0 44.0 33.7724325011765 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n02_CHAR30_3_IL HGJHJBGXM_n02_CHAR30_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 8133766.0 0.0 101.0 44.0 34.68711567281101 101.0 pass pass pass pass fail fail pass pass fail fail warn HGJHJBGXM_n02_G3_1_IL HGJHJBGXM_n02_G3_1_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 9371557.0 0.0 101.0 43.0 34.26755469045152 101.0 pass pass pass pass fail fail pass pass fail warn warn HGJHJBGXM_n02_G3_2_IL HGJHJBGXM_n02_G3_2_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 11246289.0 0.0 101.0 43.0 33.417959403163046 101.0 pass pass pass pass fail fail pass pass fail warn pass HGJHJBGXM_n02_G3_3_IL HGJHJBGXM_n02_G3_3_IL.fastq.gz Conventional base calls Sanger / Illumina 1.9 10245751.0 0.0 101.0 43.0 35.85156433610395 101.0 pass pass pass pass fail warn pass pass fail fail fail HGJHJBGXM_n02_undetermined HGJHJBGXM_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 39631630.0 0.0 101.0 46.0 23.442995099716686 101.0 pass pass pass pass fail fail pass pass fail fail pass