HGGNWBGX2_n01_w6_umi.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	HGGNWBGX2_n01_w6_umi.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11927721
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAGTGTGAAGAAATTAAAAGAATTTCTACTAAATCCCAATTGTTATATA	32379	0.27146007187793875	No Hit
ACAGTGTATTTGATGGAAGCAAGTACTTTTTAGATACCCAGTAAAAGTCT	22468	0.18836792040994252	No Hit
ACAGTGTCTTGCTGTCTCTAGCAGCTTCTAAAGCAGCGACGGCAGTAGAA	16318	0.13680735825393636	No Hit
ACAGTGTTGAAATTGTAGGTCACCAATAGCGTTAATTGGTATATTTCTTT	15893	0.13324422997486274	No Hit
ACAGTGTAACAGTTTCAACGGTGGAAGATGGGGCAGCAGTGGTGGTAGCT	14436	0.121028987851074	No Hit
ACAGTGTGTGATAACAACCTTCTTGGCACCAGCGTCAATGTGCTTTTGAG	13520	0.11334939843076478	No Hit
ACAGTGTCCACCGTTCAAAACGTTCAAGAATGGAACTGGCAAAACGTATG	12086	0.10132698442560821	No Hit
ACAGTGTGTAGCAATGTCAGTGATCATAGCAGTGGTTTCAGAAATGTTGG	12012	0.10070658091348716	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACAGTGT	628070	69.61907	1
CAGTGCG	33440	69.293755	2
CAGTGTG	239995	69.26025	2
CAGTGGG	85640	68.746666	2
ACAGTGC	61615	68.39938	1
CAGTGAG	55860	68.10062	2
CAGTGTA	196595	67.936646	2
ACAGTGG	239810	67.716515	1
AGTGTGC	50995	67.49247	3
AGTGTGT	94015	67.29799	3
GCAGTGC	22495	67.26406	1
CAGTGCA	17155	67.08778	2
AGTGGGT	34370	66.715225	3
AGTGTCG	40575	65.73449	3
AGTGCGG	8550	65.583305	3
AGTGTAG	56930	65.577866	3
AGTGGGG	21695	65.535576	3
CAGTGTC	207340	65.52172	2
AGTGTGG	59890	65.2239	3
AGTGCGT	13785	65.205635	3