HGGNWBGX2_n01_q4_umi.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	HGGNWBGX2_n01_q4_umi.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14261891
Sequences flagged as poor quality	0
Sequence length	76
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTCTATCTTGCTGTCTCTAGCAGCTTCTAAAGCAGCGACGGCAGTAGAA	39773	0.27887606208741883	No Hit
AGTCTATCTCTAAAGAAGAGCGGTCACCGAGAGTACTAACGATGGGTTCG	34935	0.2449534917915163	No Hit
AGTCTATGTCGACATGTAGTTAAACCACTATTCAGTCGGAACAATTGGTA	22932	0.16079214179942897	No Hit
AGTCTATGAAGAAATTAAAAGAATTTCTACTAAATCCCAATTGTTATATA	22440	0.15734238888798127	No Hit
AGTCTATCTCTGGAACAGCTGATGAAGCAGGTGTTGTTGTCTGTTGAGAG	21564	0.15120014589930605	No Hit
AGTCTATATGAACAACAATTGTTGTAGTCGCAACTACGGTAATTGGTCCT	20786	0.14574504881575662	No Hit
AGTCTATATTTGATGGAAGCAAGTACTTTTTAGATACCCAGTAAAAGTCT	20710	0.14521216015463867	No Hit
AGTCTATCTTCAATGGAACACCAGCGTGGTCGTGTTCCAAATCTTGCAAA	17028	0.11939510686205636	No Hit
AGTCTATCTTTAAATGGGTCAGGGAATTCGGTAGGAGATTCTGGAGGTAG	15681	0.10995035651303184	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCTAT	921230	69.8235	1
GTCTATC	335360	69.63747	2
CTACGCG	895	69.6115	4
AGTCTAG	320490	69.60222	1
GTCTATG	309300	69.46401	2
GTCTATA	212370	69.16655	2
GTCTAGG	102640	68.88527	2
CTATGCC	27130	68.40282	4
TCTATGC	75355	68.14976	3
CTATCCG	12705	67.991486	4
TCTATGT	130285	67.67653	3
CTATGTC	41075	67.471756	4
TCTATCT	163075	67.38882	3
TCTATGG	67395	67.380356	3
GTCTAGT	50355	67.31376	2
AGTCTAC	45170	67.24266	1
TCTATCC	56970	67.238335	3
GTCTAGA	88975	67.234344	2
CTATGTG	28240	67.11472	4
GTCTATT	103945	66.95973	2