Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HGGMHDRX2_n01_BUSH04 HGGMHDRX2_n01_BUSH04.fastq.gz Conventional base calls Sanger / Illumina 1.9 127773966.0 0.0 101.0 33.0 84.40805290438618 101.0 pass pass warn pass fail pass pass pass pass pass pass HGGMHDRX2_n01_BUSH20 HGGMHDRX2_n01_BUSH20.fastq.gz Conventional base calls Sanger / Illumina 1.9 155047773.0 0.0 101.0 32.0 85.99383219803988 101.0 pass pass warn pass fail pass pass pass pass pass pass HGGMHDRX2_n01_CDC1080 HGGMHDRX2_n01_CDC1080.fastq.gz Conventional base calls Sanger / Illumina 1.9 982.0 0.0 101.0 29.0 99.69450101832994 101.0 pass pass fail pass fail fail pass pass pass warn pass HGGMHDRX2_n01_CDC888 HGGMHDRX2_n01_CDC888.fastq.gz Conventional base calls Sanger / Illumina 1.9 161997573.0 0.0 101.0 33.0 84.65429771363839 101.0 pass pass warn pass fail pass pass pass pass pass pass HGGMHDRX2_n01_CDC944 HGGMHDRX2_n01_CDC944.fastq.gz Conventional base calls Sanger / Illumina 1.9 143605135.0 0.0 101.0 33.0 83.47405335678455 101.0 pass pass warn pass fail pass pass pass pass pass pass HGGMHDRX2_n01_FTG328 HGGMHDRX2_n01_FTG328.fastq.gz Conventional base calls Sanger / Illumina 1.9 183317085.0 0.0 101.0 33.0 82.79331252545423 101.0 pass pass warn pass fail pass pass pass pass pass pass HGGMHDRX2_n01_JAM20 HGGMHDRX2_n01_JAM20.fastq.gz Conventional base calls Sanger / Illumina 1.9 126627078.0 0.0 101.0 33.0 84.23543816329713 101.0 pass pass warn pass fail pass pass pass pass pass pass HGGMHDRX2_n01_undetermined HGGMHDRX2_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 194965352.0 0.0 101.0 34.0 76.3198554758379 101.0 pass pass warn pass fail warn pass pass pass pass pass HGGMHDRX2_n02_BUSH04 HGGMHDRX2_n02_BUSH04.fastq.gz Conventional base calls Sanger / Illumina 1.9 127773966.0 0.0 101.0 33.0 52.933207644243275 101.0 pass pass fail pass fail pass pass pass warn pass pass HGGMHDRX2_n02_BUSH20 HGGMHDRX2_n02_BUSH20.fastq.gz Conventional base calls Sanger / Illumina 1.9 155047773.0 0.0 101.0 33.0 55.61100762872873 101.0 pass pass fail pass fail pass pass pass warn pass pass HGGMHDRX2_n02_CDC1080 HGGMHDRX2_n02_CDC1080.fastq.gz Conventional base calls Sanger / Illumina 1.9 982.0 0.0 101.0 31.0 99.89816700610999 101.0 pass pass fail pass fail warn pass pass pass warn pass HGGMHDRX2_n02_CDC888 HGGMHDRX2_n02_CDC888.fastq.gz Conventional base calls Sanger / Illumina 1.9 161997573.0 0.0 101.0 33.0 55.23116406891494 101.0 pass pass fail pass fail pass pass pass warn pass pass HGGMHDRX2_n02_CDC944 HGGMHDRX2_n02_CDC944.fastq.gz Conventional base calls Sanger / Illumina 1.9 143605135.0 0.0 101.0 33.0 52.2525223982064 101.0 pass pass fail pass fail pass pass pass warn pass pass HGGMHDRX2_n02_FTG328 HGGMHDRX2_n02_FTG328.fastq.gz Conventional base calls Sanger / Illumina 1.9 183317085.0 0.0 101.0 33.0 52.460303535504174 101.0 pass pass fail pass fail pass pass pass warn pass pass HGGMHDRX2_n02_JAM20 HGGMHDRX2_n02_JAM20.fastq.gz Conventional base calls Sanger / Illumina 1.9 126627078.0 0.0 101.0 33.0 52.910991966320765 101.0 pass pass fail pass fail pass pass pass warn pass pass HGGMHDRX2_n02_undetermined HGGMHDRX2_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 194965352.0 0.0 101.0 35.0 50.06255620336365 101.0 pass pass fail pass fail warn pass pass warn warn pass