HGGLTBGX9_n01_6_BZIP3_BIO_10_R1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGGLTBGX9_n01_6_BZIP3_BIO_10_R1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17174150
Sequences flagged as poor quality	0
Sequence length	76
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC	632807	3.6846481485255453	TruSeq Adapter, Index 6 (100% over 50bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATG	133382	0.7766439678237351	TruSeq Adapter, Index 6 (100% over 49bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAAGGG	72570	57.818558	70
TATGCCG	86360	55.2126	46
GTATGCC	86980	54.883583	45
CGTATGC	86830	54.875515	44
ATGCCGT	86985	54.73896	47
GCCGTCT	86885	54.67035	49
TGCCGTC	87070	54.61671	48
TCTCGTA	88205	53.94165	41
CCGTCTT	88520	53.739014	50
CTCGTAT	88800	53.61854	42
TCGTATG	89140	53.533073	43
TCACGCC	87590	53.455963	30
CGCCAAT	87265	53.12085	33
ATCTCGT	89640	53.09935	40
AGTCACG	89790	53.085423	28
ACGTCTG	91025	53.01278	15
CGTCTGA	91240	52.853043	16
CACGCCA	88525	52.79173	31
ACACGTC	91795	52.755054	13
GCCAATA	88040	52.643288	34