FastQCFastQC Report
Wed 12 May 2021
HGGF2BGXJ_n02_ReSeq_Blank_Well1_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGGF2BGXJ_n02_ReSeq_Blank_Well1_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACTCTGGTTTTCTTCCCATTTCTCCAAAACACCAGATATATTAGCT22.631578947368421No Hit
GGTTAATATTGTTATGTGTGGATTTTATCCTGTCATTATGATGCTAGCTG11.3157894736842104No Hit
ACTCGGAAGCCTACAGCGAGAGAATTGGTAACACAACAGTGACTCTACGA11.3157894736842104No Hit
GTGTTTGCAGGTGCCGAGGTGGTGAGGAGGGAACTGGGGAGCTATTCAGT11.3157894736842104No Hit
TCATGAATCTGTGGATTATATAATAGATCCATTCTAGAAAAATTCTCAGC11.3157894736842104No Hit
CCCCCAAATTTATAAAAACAGTTTTAACAAAACATAGCTTTGAAAACTAA11.3157894736842104No Hit
GAAAAACACATACATAAGTCAAATACATAAAATATTACAAAACTTTGATT11.3157894736842104No Hit
CCAAAGTAGAGAATAAAGAGTTGTTAAACGAAGATAAACAAAGAATGATA11.3157894736842104No Hit
GACCTATGATGGTTATCCTTCGTTGTGTGAATGTGGCACATTAGATTGAT11.3157894736842104No Hit
CCTGAGCTGAAGGCATAGGCTTAACCCACTGAGCCACCCAGGCACCCCTC11.3157894736842104No Hit
CAACATAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAGCAGAATAATAA11.3157894736842104No Hit
GGTTAAGCCTCTGCCTTGGGCTCAGGTCATGATCCCGGGGGCCTGGGATC11.3157894736842104No Hit
GGATATAAATAAATTCCAAATTTATGGTTATACAAATTACTATAAGTACT11.3157894736842104No Hit
CAAAACAATAAATGGGATTGGCAGAGGTACAAGCAGGATGCAAACATAGT11.3157894736842104No Hit
GTATTAATGCAGTAAAATGATGCAACATTTATAAATATTTACAAACACAG11.3157894736842104No Hit
TAATAAAGAATTACCCTTAGTATAGTTTTGATAATGGAGCCAATTCTCTT11.3157894736842104No Hit
ACTAATGAAAAACTATATAAAAGAAATAATAAACAATCAAAACAGCACAA11.3157894736842104No Hit
GTGTGGCTGGACAGCGTTTCCTCTTGCCTGTCTGCTGAAAACCCTCTTTA11.3157894736842104No Hit
AGTCAGTGGAGCTCTGTGACTCCTTATCTTGTGGTTTTGAGTTTCAACCC11.3157894736842104No Hit
GATAAAGACATCTGAACAGACTATTGACCAGTAGAGAGATGAAATAAGAA11.3157894736842104No Hit
ACAAGGACCTGACATCATAAACAGAGCAAAAGGCAGCAGCAACAAACGAC11.3157894736842104No Hit
ATCCAGCACCCCGCGCCCAGGTCACACTTGGGATTGCCAGCTACTGGCCG11.3157894736842104No Hit
CACTTAGAAGTCTTCTTCATGTATTCAGACTTCCATTTCATTGACGAACG11.3157894736842104No Hit
CGCAGACCCGCGGTCGCCATCAATAACGTCGGTGGGGACTAGGCTGTCCA11.3157894736842104No Hit
ACACCTAACAGACCAAGCCACACAGGCAGCCCTTAGAGCCAACTTTAAAA11.3157894736842104No Hit
TAGAACAGGGGTGTGCTTTGATCATGGCTGCAGAACTAACCGATGATCTT11.3157894736842104No Hit
TTGTAGTGCTCAATATCTAGAACACAAATTAAATTGCTGCTAATTAACAG11.3157894736842104No Hit
ACTTTTTTCCCTCCAAAAAAATTGTTTCCTTAAGATCAGATTAACTAGAC11.3157894736842104No Hit
GTTTTATGGTGTCAATTAATATATCAGCCAATGAAAGTGGTATTCATTTA11.3157894736842104No Hit
GTTCAAGTTCTGTAATTGGAACATCGTTAGTAAATCCGCTTACACAGAAA11.3157894736842104No Hit
TTCCCGTATTGTAGAATTTGGTTTGCAGATATTTGGGTGAGGATTTTTAT11.3157894736842104No Hit
GGAAAAAAAATTAATTCATTAACAATCGTGTGTCATTAAATGGTGCAATA11.3157894736842104No Hit
GTAGAATGTTGTTTAGTCTCTGTGTTTATGAATTTCCAGTTTTGTTCTTG11.3157894736842104No Hit
CATAAAGGAAGAGTATAAATAAGAAGTGATTGATTGATTAGAATTAACTA11.3157894736842104No Hit
TCTGTGTGGGAAGCTATTTAACAGAAATAAAAATGAGGCATTTTCGCAAA11.3157894736842104No Hit
CAACAAGGATCCACCAATGAACCGATCAGAGCAGCTCAAGACCTAAAAGA11.3157894736842104No Hit
ATTCAGATATCAAAGAAACAAACAAATCAACCCTCAAATTGGAAAAAAAA11.3157894736842104No Hit
GGCTGAGACTCTGTCGGCTTTGTTCTTTTGAAAGAACCCGCTCTTTGTTG11.3157894736842104No Hit
AAAAAGTAACCACTGGTTTACAATGTTTATTATACGATTATTACACAAAT11.3157894736842104No Hit
GCCTGTATCACTATAAACTTCCTTCTTAGAACAACTTTTTTTTTTTTTTT11.3157894736842104No Hit
CGAAAGAAGAGAACGCAAGAATTAAGCCATTTCTGAATACAACACCACGT11.3157894736842104No Hit
TCGCTACAATATGCACCCACATACAAAAATTATTCATGTATTCATACTTC11.3157894736842104No Hit
ACACAGACATGAAGTAAACGTTAAAGATAACAAAATACCACAAAATTACA11.3157894736842104No Hit
AAAACAAGCAAATAATACCTCTTTCCTCCAACAATAAGTGAACACCAAAA11.3157894736842104No Hit
GTGCCATAGCCCCTGCAACCGCAACTCTAGCAGTTGAGGCTCATCAAGAA11.3157894736842104No Hit
CTTCTCAACAGTATCCACAGATGACAAAAATGTCTATCGAACAAATGCTT11.3157894736842104No Hit
AGCAAAAGCAGGGGGAGACGCAGGCAGAGGGAGATGCAGGCTCCCCACAG11.3157894736842104No Hit
GTATTGAGGATTTTTGCACCAGTATTCATCAGTGGTATTGGCCTGTAGTT11.3157894736842104No Hit
GCCCTGGGACATCCCCAGCTCGCCCCTGTGACAACCTTAGCACTCGGTAT11.3157894736842104No Hit
CAACTTAATTAATTGTTCGAATACAAAACAAAATTAAATAAATAAAAAAA11.3157894736842104No Hit
TGTGATAGCTCATGAAACAAATGTGACTTAAAGACAAATCCACCACGTCA11.3157894736842104No Hit
CTCATAAACTAATTTAAAAAACAAAATTCCTAATAAAAAAAAACACAAAA11.3157894736842104No Hit
GATTCGTAGAATTCCCAGGTGAAACCATGGGGTCCTGGACTTTTGCGTGT11.3157894736842104No Hit
TAACTAAGTTTGCATCTTATTTAGGCTAAACTATAAAGAAGAAATAATCT11.3157894736842104No Hit
CCCTTAGACTTACTGATTAACCTATCGATAAATTAAGACATACTTACCCA11.3157894736842104No Hit
CCCCAGAATGTGCTCTCTGATGCAAGGATCAACCCTCCCGAGGAGATCTG11.3157894736842104No Hit
GCAACTTGACACCTCAAGAAGGATTTTAAACATCCACGCCCCTTGGACAA11.3157894736842104No Hit
TTACTGACCCGACCTGACTTTTTCCCCAAGAGGACATAAAAATAATCCAC11.3157894736842104No Hit
GAAGTATTCCTTGGCACAGGTAAGAGTTCCAACTATCTTATAATGTGTTA11.3157894736842104No Hit
GTGTAGCATTTGACTGAGATTCTCTGCCCCTCCCCCAACCCTGGACCCTC11.3157894736842104No Hit
CCCTATATTAGTCCACAAGGGTGGGACAGGTAAGTTACTGCCCTCAGGAA11.3157894736842104No Hit
CCCCAGACCAGGGTATACAATCAGGCATAAAGGTACAGCCCCCATTTGCT11.3157894736842104No Hit
CTCGCGTTTTGGACAGTCACCCATAACACACAACTCACCCACTGAGCATC11.3157894736842104No Hit
CTCAATGACACTATGCTAAAACATGGAACATACATCAAAAGTACAATAAC11.3157894736842104No Hit
GTTTTATGAAAAAAAAGTCAGGTCTGTGTGAAAGAAAATTTTTGTGATAT11.3157894736842104No Hit
CCCTGTCGCAGTGTGTAGCGAGTCACTGAGTAAGTAGAAATACGGGGGCG11.3157894736842104No Hit
CAAAATAAGAACACCGGGATTTGGCCTTGACTCTGGGATCGAGGATTCCT11.3157894736842104No Hit
GCATTATTTTATAGAATTCCACTCACCTTAATTTTATTCCTGACCCAAAA11.3157894736842104No Hit
GGAGTGGTAACAGACTTTTCCGTAGCACCAGTCACCTCGCTTGGCTTGTC11.3157894736842104No Hit
AATATTGTCTATAGATTATAATTTTCCATTTTCAATTGGAAGAAACAGTA11.3157894736842104No Hit
TATCAGCTAGCACAAAAGAGGCAACAAAAAGATAAAAGGACAGAACTCAC11.3157894736842104No Hit
CGGCCTAATGCCTACACCGACTCCCAGACAATTAATAACTTAGCCAGCCA11.3157894736842104No Hit
ACATTGCATTTTGTTATGATTCAACAAACATGTGCCCCCAACCTAGAACA11.3157894736842104No Hit
CTACTACAACTTTGTACTAATTCAACTGTGTACGGCACTGAACGATCTTG11.3157894736842104No Hit
TCTGTACCCGACAGAGTATGATGTTGTAAAACAATTAACCGAAAACCAAG11.3157894736842104No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)