FastQCFastQC Report
Wed 12 May 2021
HGGF2BGXJ_n01_ReSeq_Blank_Well2_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGGF2BGXJ_n01_ReSeq_Blank_Well2_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACAGGTCAGACAATTCAAAAGCAGCTCCAAGCACAGTGGACAGTGAGG11.25No Hit
TCACAGTTATGAAAAGCAACTAGCAAAGACATCTAACTAGTGCCGAGCAA11.25No Hit
GAGTTGGTGACTCACAGCCAGGTAGGCTTCCCATTCCACGAGGGCTTTGG11.25No Hit
ATGGGATTCCAGATGAACTGTTTTTAGATTTCTATTTTTGTTGCAATTCC11.25No Hit
ATTTTGCCGTGATTTGAAACGCTTTCAATGACTCTTGTCTCTAGACTTCA11.25No Hit
GAGGGGGAGGCAGAGGGAGAGGGAGAAGCAGGGTCTCCGCTGAGCCGGGA11.25No Hit
GTGTCAAGCTTTCAGGTAGACTGCTTTCTTTGGCATGTCCGCAAACTATT11.25No Hit
GGAGCAGAACATGAAAAAATCCAAACACTGTAACAAGAGCCAATGAAGGG11.25No Hit
CTATTAAAACTTACATATTTGGTGCAGCAACCAAATTCATATTTACTGAT11.25No Hit
AGATAATGAAGGATGTAAATAAGATTTTCGACTTCTTTGATGTAAACTAC11.25No Hit
GTCAGGAACTCAATGATGATCTAGAAAAACACAGGACAACTGCTGTGGGA11.25No Hit
GTATTAATTGAAATGCAAAAAACCCCGGACTTATTGACCGGGGTTTTTCT11.25No Hit
TCGCTTAGCTTGTTGTGCTGGAGATCCAGGAGCAGCAGGCTGTCCAGCTT11.25No Hit
GGTGTCTCCCGGAATACCGGAGAGCGCGTTGCCGTCCAGGGCCTGTCCCC11.25No Hit
CATTAATGCATCGCTTTATCATCCGAATAAGAACCATTACCATTGTCCCG11.25No Hit
GAGCCGCCCAAGCGACCCTCCATTTTTTTTTCCTATGGTTGACATCCAGG11.25No Hit
CTCCATTTCAGATATTTTGCAGTTCCTCCCAGATTCGATTTTATTCAAAT11.25No Hit
AGGATCGTTAATATTGTTTTCATCATATGGGAGTGCATCAAATTGTGCAT11.25No Hit
GTCCTCTACTTGATCTAGCAGGCACGTTCCTCAGACCGACTGCCAGTTTG11.25No Hit
CCTTTCTCATCCATTACAACATAAAAAAACGAAAACTCGAGTAATTCCCG11.25No Hit
TTCCACTACATTATTAAGGACAACCTTTCATAAAAAAAATTAAGTGGCAT11.25No Hit
GAATTTTTACATATGGTAACTTGCATAATCCTCATTTTACAAACAAAGAA11.25No Hit
GTAAATGCATAAGCACAAGATATGAGAAAGAACGTTGTGGAAAATAGAAT11.25No Hit
CGACAGCACCAGCCGGGTATCGCCGCCGCCGGCGTCGGATTCGGCCAGGC11.25No Hit
GTCATAGAGTTCATAGTCCCCATGTGATGTGAAGTAAGACTCTCGGCCTC11.25No Hit
AAATGTCAAGGGATTGGTTAATGCTCATTCCCAAGCAGAAAGTGACAGGG11.25No Hit
CTAGAATAAGCAAGCCATGATTAGCTTGGAACTTTCACTCCCCCACCCCC11.25No Hit
GGCAGAGGGAGAAGCAGGCTCCCTACTGAGCAGGGAGCCCGATGCGGGAC11.25No Hit
GGGTAACTCTGAGCGTGCAGTTTCTAGATCAAGGTCGGGAGGTGCTGACC11.25No Hit
CTTCTTGTGACCTGCTGTTGGGAGGAAGAGAATGGTCCTACATCGTCGAA11.25No Hit
GACTGAAGAGCCACCTTCACACAAAACGGTCGCAGCACCCGACCAGCTGA11.25No Hit
GGGGTGGTAATGGTGAGATTTCGCCCACTATTGCTCCTTCCGCTGTACAC11.25No Hit
ACAAAATACAATGATGCTATTTGAAGTCCACCATACTCTGGTCTCCTGTG11.25No Hit
TAAGAACTTAAAGATGCACTGACATTTGTCACACACAGGTTACATTATGA11.25No Hit
TGTCTGTACTCCCAAGTCACGGACTAGAATTAAAAGCTGACTGAAATTTG11.25No Hit
GATATGATTTTGAGAGGGAAGGGTACTCTCTGGTTGGGATAGATCCTTTC11.25No Hit
GTGTTGTGGGGAACAGCATTAGACAACCTTGCGTCATGGAAAATGGTTGA11.25No Hit
GGTTGTAAAGGACGAACATAAAAATAAAACACAGCTGTTGGAATTTCTAC11.25No Hit
GTGCAGACTTTCTAGCGCTCTCTTAAGAAGCAGTATTTCCTCTCCAAATC11.25No Hit
GTCTCCCACCTAACTTCTCCAGCCTTGAAAACTTTAGAGCCTATGTGGAT11.25No Hit
GGTTTTTGTCCCGGGTTTGCGGTTCAATAGCTTCCTCGCCTGGGCAAGCC11.25No Hit
GTAAATAAGTAGAGCATATATGAACAAACCTAAGATAACCAAACAGCACC11.25No Hit
CCATACTACCAGGGGCAGGCAAACAGACTAGGGCCAACAGCGTGGAAGAA11.25No Hit
GGGGACATGATGCGAGTCTTAATCACAGACTGTGTCACAACAGCACATAC11.25No Hit
TGTCAGAGGGATGGGCAGGGATGAGCTAACATACCTGGGAGCTAAGCATG11.25No Hit
AAACAGTGAACAGCCCACTTTCTCACTACAGAGAAATCTTCCCTTCGAAA11.25No Hit
GGCCCGAGCCCCATGCTGACCCTCTCATGCTGTCCAATAAACCACAATCA11.25No Hit
CTGTGAGGATACGACCACGTGGCAAAAATGCAGGCACTCAGGACAAGGCT11.25No Hit
TTATATATGTTTACAATTATTATCTGATTTTCAACATACAACAATGAGTC11.25No Hit
GGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTA11.25No Hit
GGTCTTGCTAGTGCTGCACTGCTCATGGGAGAAGACGTTTAGCAGATTAT11.25No Hit
GGTGTCCCCAAAAGGGAACTACATGGGACTATTCCTTCTGCTGCGTTCTT11.25No Hit
CCAAACAACGTTCACCAACAAAATTACATACTAATAACTCTGATCAATTA11.25No Hit
GCAGCCTCCGGGCGGCAACAACTTCGCCCTTGCGCAGTCTGGCAGCGGTA11.25No Hit
CCTTTTGAGTCCGTTCCATAACACTCCATTCATTTCGATTCCATTTCTTG11.25No Hit
AGACAGCATATAATACAGGGCTTAAAGATGTAATGTATACTGTACAAGCA11.25No Hit
GCATTACAGACATTAAATATGACATAAAAATCCATCCTCAGGCAAAAAAC11.25No Hit
ATTAGAAGAAACAAGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAG11.25No Hit
GCCCTGGGACAGATGGATTCACAGCTGAGTTCTATCAGACCTATGAAGAA11.25No Hit
GACCAGGACCAGGAGAAGGCGAGTCACACCTGATGGCAAAGGAGACCCCG11.25No Hit
CTCATTCAATAGTGCATGTGTCTAGAATGAGGGGATGTCCCAGCCTTGTT11.25No Hit
TCATAATAGAAAGGAACATAACAGAGATAGTCCATTTAAATAATAATACC11.25No Hit
CCCAAACACACAAACATACACATATCCTGTGCTTCAGTCACACAGAACTT11.25No Hit
GCAGCAGACTTCCTGCTGAGCGTGGGGCTCGATCCCAGGACCCTGGGGTC11.25No Hit
TCAAAATGATGATACATATTTAATGGTCTAGAGCTGTCTCTTATACACAT11.25No Hit
TCAATGAATGTACCAACCCATCGAACAATCAAGCAGTGCCATGTGAACCA11.25No Hit
TCTTAATCCTTCCAGACTCGAAGTCAATCCGTGCATCAATTCGGGCCCTA11.25No Hit
CCAAGGCCGCCTTGCGGCTGATGAGAGCCAGGGGCTCGAAGGTCAAGATG11.25No Hit
CAAAGAAACAAGCAAATAATACCTCTTTCGTCCAAAAATAAGTGAAAAAC11.25No Hit
CTGGCAGACAGGAGACCACACTGCCAAGGTATGAGTCCGCGATCTGCTGA11.25No Hit
CTCTCTGGTTGGGATAGATCCTTTCCGTCTGCTTCAGAACAGTCAGGTCT11.25No Hit
TCTCAGTCAATATTATCGAAAAAATCAAAAACAACAGCGATTCAGAAACG11.25No Hit
GTAGTAGTTTGATTATTTGAACAGAGTGGAACGTTCCCAAATCATCTCGG11.25No Hit
GGTTAACACAGTGGCGAGGGGAAGGGCGCCGGTAACTTTCGCGTTCTTGA11.25No Hit
AGTGGGAGGAGCCAGTTGAGGGATGACCTCATCGAGCAGGTGCCACACCT11.25No Hit
TCGGAACCGAGTAGTGCTGCATGAGACATAGCCAGTCGAACGCTGTGTGG11.25No Hit
GCCAGATACAAAGAAAGAGGAATCATCAACAGAAATGAGAGACATGTTCC11.25No Hit
GTTTCGGGAGACCGAGACGGGCGACGAGTGCCCGGCGAGCAAGAGCTTCT11.25No Hit
AGAAAAGACTTTATGTTTGAATTATGAAAGCAGGGTTAAAGAGAGATTAA11.25No Hit
GCTGATAGAGTCTCAGCCAGATTAAAAGAAAGAGGACTAATCATCAGAAA11.25No Hit

[WARN]Adapter Content

Adapter graph