FastQCFastQC Report
Tue 10 Aug 2021
HGG72DRXY_n02_1744-1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGG72DRXY_n02_1744-1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10764279
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG188280.17491185429140216No Hit
TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT179190.1664672571195897No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT113860.10577577931601365No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)