FastQCFastQC Report
Tue 10 Aug 2021
HGG72DRXY_n02_1734-3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGG72DRXY_n02_1734-3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11253341
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT479860.4264155862690022No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT275640.2449405914208056No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG249710.2218985455075075No Hit
TTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT152900.1358707605145885No Hit
TTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT149630.13296495680704956No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)