FastQCFastQC Report
Thu 22 Sep 2022
HGG3LDRX2_n02_br167.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGG3LDRX2_n02_br167.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8251760
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATT330840.4009326495196176No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCC314040.38057335647183144No Hit
GTTCAATACATCGGATCGACGCGTAAACGGTACGTCGGCCTGGAGACTAG285920.34649577787041796No Hit
GTTCAATACATCGGATAGTTCGCGACACCGTTCGTCGGCCTGGAGACTAG221200.26806402512918454No Hit
GTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCT219850.26642801050927317No Hit
GGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGC163380.19799412488972049No Hit
GTTCAATACATCGGACGATACGCGTTGGTACGCGTAAGCCTGGAGACTAG158060.1915470154245882No Hit
GTTCAATACATCGGACCGTACGTCGTGTCGAACGACGGCCTGGAGACTAG134110.16252290420467877No Hit
CTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCG128390.15559104966698015No Hit
GTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAG122380.14830775495167092No Hit
GTGCTAGAGCTTGCTACGACCAATTGAGCTATTATGCGCGCGATACGCGT93260.11301831366884155No Hit
GTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATC89800.10882526879114274No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)