FastQCFastQC Report
Thu 22 Sep 2022
HGG3LDRX2_n02_br127.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGG3LDRX2_n02_br127.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35161473
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCAATACATCGGAACGCGAATCGTCGACGCGTATAGCCTGGAGACTAG448120.12744631034086656No Hit
GTTCAATACATCGGACGCGATATCACTCGACGCGATAGCCTGGAGACTAG441330.12551521945624974No Hit
ACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATT381290.1084397118402861No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)