FastQCFastQC Report
Thu 22 Sep 2022
HGG3LDRX2_n01_br164.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGG3LDRX2_n01_br164.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8250512
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATT158110.1916365917654565No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCC153910.18654599859984447No Hit
GTTCAATACATCGGATCGACGCGTAAACGGTACGTCGGCCTGGAGACTAG130120.1577114244546278No Hit
GTTCAATACATCGGATAGTTCGCGACACCGTTCGTCGGCCTGGAGACTAG102190.12385897990330783No Hit
GTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCT100590.12191970631640801No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)