HGFWJBGX9_n02_MT_8404.TR4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGFWJBGX9_n02_MT_8404.TR4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14456653
Sequences flagged as poor quality	0
Sequence length	151
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	25385	0.17559389438205372	No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGC	21730	0.15031141717242572	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	17707	0.12248339916576818	No Hit
CCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTC	17421	0.12050507126372889	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	16699	0.11551083089564368	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	16119	0.11149883724815143	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	16006	0.1107171902099331	No Hit
GAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG	15152	0.10480987542552207	No Hit
CTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTG	14712	0.10176629403776932	No Hit
AGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATGA	14594	0.10095006084741745	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	14472	0.10010615873535873	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGTATA	1520	48.171814	145
TGTGTAT	2650	47.601273	145
TCGTGTT	4605	43.450485	145
GAGTCTA	6200	41.296055	2
CGCTCAG	4310	41.206284	4
TACTTCC	9060	40.884323	5
CTTTTAC	9410	40.43277	1
GCTCAGA	4610	40.410694	5
TTACTTC	9310	39.631702	4
ACTTCCT	9690	38.526104	6
GCCAGTA	4480	38.510002	4
CTTGTTA	3740	36.110477	1
TGTCTTG	4055	35.935226	145
CTCGGCT	5740	35.29264	1
TTACGAC	3975	34.101116	5
TCCTCTA	10895	33.998226	9
GTAGCAT	5130	33.77129	8
TTTTACT	11300	33.569805	2
TTCGCCG	8120	33.480385	145
TAGCATA	5160	33.434116	9