HGFWJBGX9_n01_MT_8404.TR4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGFWJBGX9_n01_MT_8404.TR4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14456653
Sequences flagged as poor quality	0
Sequence length	151
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	24356	0.1684760642729683	No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGC	22386	0.15484912033234802	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	18555	0.12834921056761894	No Hit
CCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTC	18523	0.1281278591939642	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	17587	0.1216533315145629	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	16511	0.11421039157542205	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	16157	0.11176169200436643	No Hit
GAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG	15978	0.11052350775798521	No Hit
AGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATGA	15594	0.10786729127412824	No Hit
CTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTG	15589	0.10783270512199469	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	14914	0.10316357458396491	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTCAGA	4620	41.42927	5
GCCAGTA	4425	39.158855	4
CGCTCAG	4685	39.15221	4
CTTGTTA	3195	39.034176	1
TGCCGTG	5965	38.771587	145
GAGTCTA	6300	38.66786	2
TACTTCC	8535	37.630985	5
CGTATGG	4360	36.582176	145
TTACTTC	8690	36.37576	4
CTTTTAC	9030	35.732193	1
CTCGGCT	5915	35.671856	1
GCATCTG	6875	35.643257	145
TTACGAC	3595	35.494343	5
ACTTCCT	9330	34.501595	6
GTTACGA	3820	33.40371	4
GTAGCAT	5215	32.94742	8
TAGCATA	5300	32.28301	9
TTGTGTC	3090	31.675734	2
AGTCTAA	7790	31.457857	3
CCAGTAG	5420	31.30127	5