FastQCFastQC Report
Thu 7 Jul 2022
HGFNTBGXM_n01_AKM392.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGFNTBGXM_n01_AKM392.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16401249
Sequences flagged as poor quality0
Sequence length76
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTAT2235631.3630852138151186TruSeq Adapter, Index 7 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)