FastQCFastQC Report
Thu 7 Jul 2022
HGFNTBGXM_n01_AKM380.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGFNTBGXM_n01_AKM380.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15953669
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGC301740.18913517636601337TruSeq Adapter, Index 10 (100% over 50bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)