FastQCFastQC Report
Tue 17 Aug 2021
HGFHNDRXY_n01_glr4mutant1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGFHNDRXY_n01_glr4mutant1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104143166
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3210740.3083005945872627No Hit
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTACATATCTCGTA2034010.19530902296555877TruSeq Adapter, Index 11 (97% over 41bp)
CTTTGTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1344170.12906943889145833No Hit
GTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1331470.1278499637700663No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)