HGCFKBGX9_n01_C.F1.mbWGA.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HGCFKBGX9_n01_C.F1.mbWGA.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	31773614
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCATG	25895	0.0	8.920565	70
GCATGGG	14905	0.0	8.453466	70
ATGGCAT	38360	0.0	8.047376	70
GGCATGG	18905	0.0	7.905247	70
CCATGGC	49220	0.0	7.7224035	70
ACCATGG	54215	0.0	7.6371193	70
CATGGCA	44045	0.0	7.612639	69
CATGGGG	12360	0.0	7.588931	70
CACCATG	62940	0.0	7.3513823	70
GTCACCA	80120	0.0	6.390983	70
TCACCAT	75835	0.0	6.2536845	69
AGTCACC	85215	0.0	6.2306566	70
CAGTCAC	95320	0.0	5.65826	70
GGCATCG	15760	0.0	5.440943	70
ATGGGGG	13730	0.0	5.3786864	70
CCAGTCA	103745	0.0	5.1819158	69