HGCFKBGX9_n01_C.F1.feWGA.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HGCFKBGX9_n01_C.F1.feWGA.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32498088
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCGATG	41305	0.0	7.1432695	70
CCAGGCG	101430	0.0	6.1249714	70
GGCGATC	48095	0.0	6.0256395	69
ACCAGGC	108785	0.0	5.9296417	70
AGGCGAT	77715	0.0	5.841279	69
GCGATCT	36885	0.0	5.674455	69
CAGGCGA	89530	0.0	5.652916	69
CAGGCGC	15985	0.0	5.6490993	70
CACCAGG	120015	0.0	5.6168504	70
GCGATCG	16755	0.0	5.5148234	70
TCACCAG	137440	0.0	5.368211	70
CGATCTC	37815	0.0	5.3405237	70
GCTTGAA	17590	0.0	5.2928376	69
CTCGTAT	21010	0.0	5.2142324	70
GTCACCA	144175	0.0	5.1320133	69
CTGCTTG	17275	0.0	5.004581	66