HGCFKBGX9_n01_C.F1.fdWGA.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HGCFKBGX9_n01_C.F1.fdWGA.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29955246
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACTCAA	80875	0.0	5.9290075	70
TATGCCG	23425	0.0	5.8417335	55
ACTCAAT	70250	0.0	5.8093557	70
CCACTCA	84765	0.0	5.7188916	69
TGCTTGA	21450	0.0	5.580789	67
ACCACTC	90015	0.0	5.533065	70
GTATGCC	24725	0.0	5.478111	54
GCTTGAA	22935	0.0	5.463627	68
CTGCTTG	21085	0.0	5.3784165	66
CACCACT	100355	0.0	5.374516	70
ATGCCGT	24455	0.0	5.3668003	57
TCACCAC	107970	0.0	5.322869	70
CTCAATC	60190	0.0	5.245185	69
CGTATGC	26070	0.0	5.142017	53
AATCTCG	43440	0.0	5.1324577	70
GCCGTCT	25700	0.0	5.0251036	59