HG5M3BCX2_l02n02_r3zt14s9.352000000d7bff.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HG5M3BCX2_l02n02_r3zt14s9.352000000d7bff.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1989
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
ATCTAGGACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGT	9	0.4524886877828055	No Hit
GTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACTTTTGA	7	0.35193564605329314	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7	0.35193564605329314	No Hit
GGCTAAAACCAAGCGATCGCAAGATCGTTATATTGGTTGAACTCTAGATA	5	0.2513826043237808	No Hit
GTATGGTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACT	3	0.1508295625942685	No Hit
ACTCTAGATAACATGCAGATCGTATGGTCTTGTACCGACGACAGATCTTT	3	0.1508295625942685	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	3	0.1508295625942685	No Hit
GTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAA	3	0.1508295625942685	No Hit
GTAGTATCTAGGACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGA	3	0.1508295625942685	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	3	0.1508295625942685	No Hit
GAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAG	3	0.1508295625942685	No Hit
CTAGATAACATGCAGATCGTATGGTCTTGTACCGACGACAGATCTTTCAA	3	0.1508295625942685	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	2	0.10055304172951231	No Hit
TCGTATGGTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAA	2	0.10055304172951231	No Hit
TCGTTATATTGGTTGAACTCTAGATAACATGCAGATCGTATGGTCTTGTA	2	0.10055304172951231	No Hit
ATTAAAACATGAACCTTATGGGACATGTGCTTTTATTAGGCTAAAACCAA	2	0.10055304172951231	No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	2	0.10055304172951231	No Hit
GAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTA	2	0.10055304172951231	No Hit
ATCTAGGACTACCCTGATTCCCCGTTACCCGTTGCAACCATGGTAGTCCT	2	0.10055304172951231	No Hit
GATTTAAAGTGTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGT	2	0.10055304172951231	No Hit
GCACAGGGAGACGTGTGCTCTTCCGATCTGCACAGGGAGACGTGTGCTCT	2	0.10055304172951231	Illumina Multiplexing PCR Primer 2.01 (100% over 21bp)
GTGTTATTGTGGGCCGGTACTATTACTTTGAACAAATTAGAGTGCTTAAA	2	0.10055304172951231	No Hit
TCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATG	2	0.10055304172951231	No Hit
ATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAACTACGAACGTTT	2	0.10055304172951231	No Hit
CTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTC	2	0.10055304172951231	No Hit
GCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGATAATGAA	2	0.10055304172951231	No Hit
AGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAA	2	0.10055304172951231	No Hit
GCCATGGGAGACGTGTGCTCTTCCGATCTGCCATGGGAGACGTGTGCTCT	2	0.10055304172951231	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
GTATGAAGCACAAGTTCAACTACGAACGTTTTAACCGCAACAACTTTAAT	2	0.10055304172951231	No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	2	0.10055304172951231	No Hit
CATAAAGGTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAA	2	0.10055304172951231	No Hit
TTTCAAATGTCTGCCCTATCAACTTTTGATGGTAGTATCTAGGACTACCA	2	0.10055304172951231	No Hit
GTAATACGCTTACATACATAAAGGTATAGTACTAACCACAATTGTAAGTT	2	0.10055304172951231	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers

Summary