FastQCFastQC Report
Tue 15 May 2018
HG5M3BCX2_l02n02_r3zt14s86.352000000d85cb.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG5M3BCX2_l02n02_r3zt14s86.352000000d85cb.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length101
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTAATTGAGTTGAACAGCAGAGAGAGCGTCCTTTTAGGAGAGACTCAA15.555555555555555No Hit
GAACCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTA15.555555555555555No Hit
GTCCGTATACATCGACTTACGTCTTCGCACGGACCTGTGTTTTTGGTAAA15.555555555555555No Hit
CCGCCCAAGTGCCATCCAACATCTATAGACACGTGACCGGCTGAGTTTGT15.555555555555555No Hit
CCAGTGGAATGCTTAGAGAGACGCGGACGAACCGTGGGGGATGTCCGAGA15.555555555555555No Hit
AAGGGAGCTAATTAACTAGGTCACAGGTCTGTCGTTGCCGCAGAAGCTGC15.555555555555555No Hit
TCAACCCCACCATCAACTGGCCCGTCCCGTCCGCCTCCCAAGTCACTCCT15.555555555555555No Hit
TGGTAATCCTCTCCAGATACGGAAGCATGTAGCCCATACGTCGCGCCTCA15.555555555555555No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA15.555555555555555No Hit
GTATCGTGCTCTGCAGTGCCCACCCCCACGCCCGGTGGGTGCGGCCTTTC15.555555555555555No Hit
GTACAGGCCGTATGGAGAGCGTGTTGCGGCGGCTGCAGCCGCTCTCACTG15.555555555555555No Hit
GGCGGTGGAGCGGATTAGATGTCTTCGTAGCATCTCTCACCGTAACCCCA15.555555555555555No Hit
TCAGGCGGAGAACACCAGCCTCAAAGCCCACAAGCACAACGGCTAACAAA15.555555555555555No Hit
GAGAGGGAAGGGGCGTGGGTCGGAGCTGGCGGAGGGGAGAGGGTGGGCCC15.555555555555555No Hit
ACTTAATGGAGGGAAGGAGGGAAGAGCAACAGAGGCGACGGACGGCCCCC15.555555555555555No Hit
CGCCGAGAGACTAAGCCCCGACCACCCGCAACCCCCGCCAGCGCCGACAC15.555555555555555No Hit
AAAAAAAAAAAAAAAAAAAAAAATAAATTTCTCCCCCCACCAAACCCAAG15.555555555555555No Hit
CAGGACGCACTCCACACATAAGCTCGTCAGTCACCTACAGCAGAACTCCC15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)