FastQCFastQC Report
Tue 15 May 2018
HG5M3BCX2_l02n01_r3zt14s96.351000000d8702.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG5M3BCX2_l02n01_r3zt14s96.351000000d8702.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length101
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGAGGGAACCACCACTTGCAGGTAGTTGAGACGATGGCCAAGGTGACTC14.761904761904762No Hit
GTTGATCACCAGGGACGCCACATGGGGCCAGAGGTGGAGCTGGCCTCGCT14.761904761904762No Hit
CTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCT14.761904761904762No Hit
AAGATGGGAAAGGTCATGCGGCATACGCTCGGCGCCAGTTTGAATATTAG14.761904761904762No Hit
AACCACCACTTGCAGGTAGTTGAGACGATGGCCAAGGTGACTCATCAGCT14.761904761904762No Hit
GGCTACGTTCATGCTGCCAATGAAGTGTCCAAAACCTTGGCCGCTGTACC14.761904761904762No Hit
GACCATAGCTTGATCCTCGACTGGAGCTTGAAGAGGCACTCCGATGGGCA14.761904761904762No Hit
AGCAGCAAGGTCCATATCTGACTTTTTGTTAACGTATTTAGCCACATAGA14.761904761904762No Hit
CGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCC14.761904761904762No Hit
ATCCTCTACTGGAGCTTGAAGAGGCACTCCGATGGGCAGCGAGGGAACCA14.761904761904762No Hit
GCAGCCATCTCTATAGCCGGAATTTGAGGCTCTGCTAGAGATGATCGGTG14.761904761904762No Hit
TGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGC14.761904761904762No Hit
GACCATAGCTTGATCCTCTACTGGAGCTTGAAGAGGCACTCCGATGGGCA14.761904761904762No Hit
AGAAAACTGGCCTAACGACGTTTGGTCAGTTCCATCAACATCATAGCCAG14.761904761904762No Hit
GGAAGCCAAGATGGGAAAGGTCATGCGGCATACGCTCGGCGCCAGTTTGA14.761904761904762No Hit
CTACTGGAGCTTGAAGAGGCACTCCGATGGGCAGCGAGGGAACCACCACT14.761904761904762No Hit
TCGTAACCCAGCTTGGTAAGTTGGATTAAGCACTCCGTGGACAGATTTGT14.761904761904762No Hit
GCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGACTCAAA14.761904761904762No Hit
AGCAGAGGAAGCATCAGCACCAGCACGCTCCCAAGCATTAAGCTCAGGAA14.761904761904762No Hit
GGGAAAGCTATTCCTGGGCACCAATTGATGATCTCCAAGGAGTTCGGTGC14.761904761904762No Hit
GTATAAGTCAAAGCACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCGC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)