FastQCFastQC Report
Mon 14 May 2018
HG5M3BCX2_l02n01_r3zt14s47.351000000d80aa.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG5M3BCX2_l02n01_r3zt14s47.351000000d80aa.fastq.gz
File typeConventional base calls
EncodingIllumina 1.3
Total Sequences3
Sequences flagged as poor quality0
Sequence length101
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTGTTCTGCTTTGTACGTCGCGACGGAGTAATGGTATGTATATAAAT133.33333333333333No Hit
GTCTAGGAAATACACGTTGATACTTTCATTGTAGCGCGCGTGCAGCCCAG133.33333333333333No Hit
CTAAACAACTTAGAGTTATCATGTGAAATTTGTGAACCCTGTCTAAATGG133.33333333333333No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)