MultiQC Report

A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

General Statistics

Showing ²⁰⁰/₂₀₀ rows and ³/₅ columns.

Sample Name	% Dups	% GC	Length	% Failed	M Seqs
HG5M3BCX2_l01n01_r2zt2wts14.351000000d4e4c	0.0%	47%	101 bp	36%	0.0
HG5M3BCX2_l01n01_r2zt2wts22.351000000d4e65	0.0%	43%	101 bp	36%	0.0
HG5M3BCX2_l01n01_r2zt2wts75.351000000d4feb	0.0%	49%	101 bp	36%	0.0
HG5M3BCX2_l01n01_r2zt2wts86.351000000d502d	19.0%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s1.351000000d7b38	90.4%	47%	101 bp	50%	15.6
HG5M3BCX2_l01n01_r3zt2s10.351000000d7c51	66.1%	47%	101 bp	42%	4.0
HG5M3BCX2_l01n01_r3zt2s11.351000000d7c7a	69.8%	45%	101 bp	42%	9.9
HG5M3BCX2_l01n01_r3zt2s12.351000000d7c94	28.5%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s13.351000000d7cbd	25.1%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s14.351000000d7cca	19.7%	44%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s15.351000000d7cf1	16.0%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s16.351000000d7d0f	0.9%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s17.351000000d7d36	41.7%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s18.351000000d7d50	79.6%	48%	101 bp	42%	6.7
HG5M3BCX2_l01n01_r3zt2s19.351000000d7d79	31.4%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s2.351000000d7b52	35.8%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s20.351000000d7d93	24.0%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s21.351000000d7dc9	22.4%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s22.351000000d7df0	82.9%	48%	101 bp	50%	4.8
HG5M3BCX2_l01n01_r3zt2s23.351000000d7e1b	13.5%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s24.351000000d7e35	1.3%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s25.351000000d7e5f	35.5%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s26.351000000d7e78	20.2%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s27.351000000d7e92	24.6%	46%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s28.351000000d7ed5	16.3%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s29.351000000d7eff	19.3%	46%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s3.351000000d7b7b	38.6%	44%	101 bp	50%	0.0
HG5M3BCX2_l01n01_r3zt2s30.351000000d7f27	84.2%	49%	101 bp	50%	6.6
HG5M3BCX2_l01n01_r3zt2s31.351000000d7f34	12.3%	46%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s32.351000000d7f5e	0.0%	43%	101 bp	36%	0.0
HG5M3BCX2_l01n01_r3zt2s33.351000000d7f6a	68.8%	42%	101 bp	42%	3.9
HG5M3BCX2_l01n01_r3zt2s34.351000000d7f84	78.2%	50%	101 bp	42%	4.2
HG5M3BCX2_l01n01_r3zt2s35.351000000d7fae	32.5%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s36.351000000d7fc7	28.4%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s37.351000000d7fd4	28.6%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s38.351000000d7ffe	13.3%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s39.351000000d8016	11.8%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s4.351000000d7b88	32.2%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s40.351000000d8023	3.7%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s41.351000000d804d	44.9%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s42.351000000d8066	79.2%	47%	101 bp	42%	4.9
HG5M3BCX2_l01n01_r3zt2s43.351000000d8080	28.8%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s44.351000000d809d	22.7%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s45.351000000d80c3	21.8%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s46.351000000d80ed	16.7%	43%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s47.351000000d8115	68.9%	46%	101 bp	50%	3.3
HG5M3BCX2_l01n01_r3zt2s48.351000000d8159	1.8%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s49.351000000d8172	36.6%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s5.351000000d7ba2	72.4%	50%	101 bp	42%	3.4
HG5M3BCX2_l01n01_r3zt2s50.351000000d819c	20.7%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s51.351000000d81a9	26.3%	45%	101 bp	50%	0.0
HG5M3BCX2_l01n01_r3zt2s52.351000000d81c2	30.4%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s53.351000000d81f9	66.3%	46%	101 bp	50%	4.0
HG5M3BCX2_l01n01_r3zt2s54.351000000d8207	9.8%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s55.351000000d8221	10.3%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s56.351000000d824b	0.0%	44%	101 bp	36%	0.0
HG5M3BCX2_l01n01_r3zt2s57.351000000d8264	39.8%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s58.351000000d828e	19.2%	46%	101 bp	25%	0.0
HG5M3BCX2_l01n01_r3zt2s59.351000000d82a8	21.9%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s6.351000000d7bcb	25.5%	41%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s60.351000000d82c1	15.7%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s61.351000000d82eb	74.6%	47%	101 bp	42%	3.4
HG5M3BCX2_l01n01_r3zt2s62.351000000d82f8	11.5%	44%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s63.351000000d8313	9.9%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s64.351000000d833d	0.0%	42%	101 bp	36%	0.0
HG5M3BCX2_l01n01_r3zt2s65.351000000d8357	44.4%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s66.351000000d8370	29.7%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s67.351000000d838d	71.0%	46%	101 bp	50%	5.2
HG5M3BCX2_l01n01_r3zt2s68.351000000d83a7	29.8%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s69.351000000d83c0	24.4%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s7.351000000d7be5	27.5%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s70.351000000d83ea	81.3%	49%	101 bp	42%	4.5
HG5M3BCX2_l01n01_r3zt2s71.351000000d83f7	81.6%	48%	101 bp	50%	5.4
HG5M3BCX2_l01n01_r3zt2s72.351000000d842f	0.0%	44%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s73.351000000d843c	42.2%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s74.351000000d8456	80.1%	46%	101 bp	42%	7.3
HG5M3BCX2_l01n01_r3zt2s75.351000000d8462	73.7%	47%	101 bp	42%	5.6
HG5M3BCX2_l01n01_r3zt2s76.351000000d848c	25.6%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s77.351000000d8499	18.7%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s78.351000000d84b2	18.0%	44%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s79.351000000d84dc	13.8%	46%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s8.351000000d7c00	0.0%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s80.351000000d84f6	2.9%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s81.351000000d8504	42.7%	45%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s82.351000000d853b	26.7%	45%	101 bp	25%	0.0
HG5M3BCX2_l01n01_r3zt2s83.351000000d8555	80.2%	46%	101 bp	50%	6.3
HG5M3BCX2_l01n01_r3zt2s84.351000000d857e	35.4%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s85.351000000d858b	80.0%	48%	101 bp	50%	4.4
HG5M3BCX2_l01n01_r3zt2s86.351000000d85a5	18.9%	42%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s87.351000000d85b1	12.1%	46%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s88.351000000d85db	0.0%	45%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s89.351000000d85f5	42.3%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s9.351000000d7c37	83.3%	44%	101 bp	50%	4.7
HG5M3BCX2_l01n01_r3zt2s90.351000000d8603	27.3%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n01_r3zt2s91.351000000d862d	33.5%	47%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s92.351000000d8647	81.7%	51%	101 bp	42%	15.3
HG5M3BCX2_l01n01_r3zt2s93.351000000d867d	32.3%	46%	101 bp	50%	0.0
HG5M3BCX2_l01n01_r3zt2s94.351000000d86a4	14.3%	46%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s95.351000000d86b0	14.5%	47%	101 bp	42%	0.0
HG5M3BCX2_l01n01_r3zt2s96.351000000d86da	0.0%	44%	101 bp	36%	0.0
HG5M3BCX2_l01n02_r2zt2wts14.352000000d4e49	0.0%	49%	101 bp	45%	0.0
HG5M3BCX2_l01n02_r2zt2wts22.352000000d4e62	0.0%	44%	101 bp	36%	0.0
HG5M3BCX2_l01n02_r2zt2wts75.352000000d4fe8	0.0%	42%	101 bp	36%	0.0
HG5M3BCX2_l01n02_r2zt2wts86.352000000d502a	0.0%	49%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s1.352000000d7b35	56.5%	49%	101 bp	25%	15.6
HG5M3BCX2_l01n02_r3zt2s10.352000000d7c5e	57.5%	47%	101 bp	33%	4.0
HG5M3BCX2_l01n02_r3zt2s11.352000000d7c77	49.4%	46%	101 bp	25%	9.9
HG5M3BCX2_l01n02_r3zt2s12.352000000d7c91	1.7%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s13.352000000d7cba	0.7%	47%	101 bp	17%	0.0
HG5M3BCX2_l01n02_r3zt2s14.352000000d7cc7	4.1%	45%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s15.352000000d7cfe	0.7%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s16.352000000d7d0c	0.0%	46%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s17.352000000d7d33	2.6%	47%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s18.352000000d7d5d	65.8%	48%	101 bp	33%	6.7
HG5M3BCX2_l01n02_r3zt2s19.352000000d7d76	1.8%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s2.352000000d7b5f	4.0%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s20.352000000d7d90	1.2%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s21.352000000d7dc6	3.1%	47%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s22.352000000d7dfd	75.4%	48%	101 bp	50%	4.8
HG5M3BCX2_l01n02_r3zt2s23.352000000d7e18	2.8%	47%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s24.352000000d7e32	0.0%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s25.352000000d7e5c	3.4%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s26.352000000d7e75	2.5%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s27.352000000d7e9f	2.2%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s28.352000000d7ed2	0.7%	51%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s29.352000000d7efc	1.6%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s3.352000000d7b78	2.8%	48%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s30.352000000d7f24	75.6%	49%	101 bp	50%	6.6
HG5M3BCX2_l01n02_r3zt2s31.352000000d7f31	1.5%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s32.352000000d7f5b	0.0%	45%	101 bp	36%	0.0
HG5M3BCX2_l01n02_r3zt2s33.352000000d7f67	60.8%	43%	101 bp	33%	3.9
HG5M3BCX2_l01n02_r3zt2s34.352000000d7f81	66.8%	50%	101 bp	42%	4.2
HG5M3BCX2_l01n02_r3zt2s35.352000000d7fab	1.0%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s36.352000000d7fc4	1.2%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s37.352000000d7fd1	0.7%	48%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s38.352000000d7ffb	2.9%	46%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s39.352000000d8013	0.3%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s4.352000000d7b85	2.0%	50%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s40.352000000d8020	0.0%	49%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s41.352000000d804a	2.3%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s42.352000000d8063	62.1%	47%	101 bp	33%	4.9
HG5M3BCX2_l01n02_r3zt2s43.352000000d808d	1.6%	48%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s44.352000000d809a	1.3%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s45.352000000d80c0	1.5%	48%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s46.352000000d80ea	6.8%	44%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s47.352000000d8112	57.0%	47%	101 bp	42%	3.3
HG5M3BCX2_l01n02_r3zt2s48.352000000d8156	0.0%	46%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s49.352000000d817f	1.0%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s5.352000000d7baf	66.3%	50%	101 bp	33%	3.4
HG5M3BCX2_l01n02_r3zt2s50.352000000d8199	1.4%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s51.352000000d81a6	1.2%	49%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s52.352000000d81cf	0.7%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s53.352000000d81f6	48.3%	48%	101 bp	25%	4.0
HG5M3BCX2_l01n02_r3zt2s54.352000000d8204	1.6%	47%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s55.352000000d822e	0.0%	47%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s56.352000000d8248	0.0%	44%	101 bp	36%	0.0
HG5M3BCX2_l01n02_r3zt2s57.352000000d8261	1.5%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s58.352000000d828b	0.5%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s59.352000000d82a5	0.8%	49%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s6.352000000d7bc8	8.5%	42%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s60.352000000d82ce	0.5%	50%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s61.352000000d82e8	58.3%	49%	101 bp	33%	3.4
HG5M3BCX2_l01n02_r3zt2s62.352000000d82f5	3.1%	45%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s63.352000000d8310	0.0%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s64.352000000d833a	0.0%	38%	101 bp	36%	0.0
HG5M3BCX2_l01n02_r3zt2s65.352000000d8354	1.8%	47%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s66.352000000d837d	2.2%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s67.352000000d838a	59.6%	47%	101 bp	33%	5.2
HG5M3BCX2_l01n02_r3zt2s68.352000000d83a4	1.6%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s69.352000000d83cd	2.3%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s7.352000000d7be2	1.8%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s70.352000000d83e7	72.9%	50%	101 bp	33%	4.5
HG5M3BCX2_l01n02_r3zt2s71.352000000d83f4	73.0%	49%	101 bp	33%	5.4
HG5M3BCX2_l01n02_r3zt2s72.352000000d842c	0.0%	44%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s73.352000000d8439	1.2%	47%	101 bp	25%	0.0
HG5M3BCX2_l01n02_r3zt2s74.352000000d8453	70.2%	47%	101 bp	33%	7.3
HG5M3BCX2_l01n02_r3zt2s75.352000000d846f	65.5%	47%	101 bp	33%	5.6
HG5M3BCX2_l01n02_r3zt2s76.352000000d8489	1.4%	50%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s77.352000000d8496	1.6%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s78.352000000d84bf	4.7%	44%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s79.352000000d84d9	0.5%	48%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s8.352000000d7c0d	0.0%	46%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s80.352000000d84f3	0.7%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s81.352000000d8501	1.9%	47%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s82.352000000d8538	1.5%	48%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s83.352000000d8552	64.2%	47%	101 bp	33%	6.3
HG5M3BCX2_l01n02_r3zt2s84.352000000d857b	1.9%	50%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s85.352000000d8588	61.7%	50%	101 bp	50%	4.4
HG5M3BCX2_l01n02_r3zt2s86.352000000d85a2	7.5%	43%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s87.352000000d85be	0.3%	49%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s88.352000000d85d8	0.0%	44%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s89.352000000d85f2	0.9%	50%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s9.352000000d7c34	74.0%	44%	101 bp	50%	4.7
HG5M3BCX2_l01n02_r3zt2s90.352000000d8600	1.2%	50%	101 bp	42%	0.0
HG5M3BCX2_l01n02_r3zt2s91.352000000d862a	0.8%	50%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s92.352000000d8644	74.9%	51%	101 bp	33%	15.3
HG5M3BCX2_l01n02_r3zt2s93.352000000d867a	1.1%	50%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s94.352000000d86a1	2.7%	47%	101 bp	50%	0.0
HG5M3BCX2_l01n02_r3zt2s95.352000000d86bd	0.0%	50%	101 bp	33%	0.0
HG5M3BCX2_l01n02_r3zt2s96.352000000d86d7	0.0%	41%	101 bp	36%	0.0

Uncheck the tick box to hide columns. Click and drag the handle on the left to change order.

Sort	Group	Column	Description	ID	Scale
\|\|	FastQC	% Dups	% Duplicate Reads	`percent_duplicates`	None
\|\|	FastQC	% GC	Average % GC Content	`percent_gc`	None
\|\|	FastQC	Length	Average Sequence Length (bp)	`avg_sequence_length`	None
\|\|	FastQC	% Failed	Percentage of modules failed in FastQC report (includes those not plotted here)	`percent_fails`	None
\|\|	FastQC	M Seqs	Total Sequences (millions)	`total_sequences`	read_count

Lane Statistics

Showing ¹/₁ rows and ⁴/₄ columns.

Lane	Total # of Single-End Reads	Total # PF Reads	Undetermined	% PhiX Aligned
1.0	145046637	139579050	4.3	1.3

Uncheck the tick box to hide columns. Click and drag the handle on the left to change order.

Sort	Column	Description	ID	Scale
\|\|	Total # of Single-End Reads	Total # of Single-End Reads	`Total # of Single-End Reads`	None
\|\|	Total # PF Reads	Total # PF Reads	`Total # PF Reads`	None
\|\|	Undetermined	Undetermined	`Undetermined`	None
\|\|	% PhiX Aligned	% PhiX Aligned	`% PhiX Aligned`	None

Lane 1 Demultiplexing Report

Lane 1 Demultiplexing Report
Total Read Count: Total number of PF (Passing Filter) reads in this library.
Portion: The proportion of reads that represent the individual library in the entire Library Pool.
Perfect: The percentage of reads in this library which have a barcode perfectly matching the barcode specified in TuboWeb. The remainder of reads have mismatches upto the max number of mismatches specified in TuboWeb (Allowed barcode mismatch option in your Library Pool).

Showing ⁹⁶/₉₆ rows and ³/₃ columns.

Library	Total Read Count	Portion (%)	Perfect (%)
r3zt2s7	1361	0.0	34.0
r3zt2s17	3385	0.0	37.6
r3zt2s58	826.0	0.0	40.7
r3zt2s19	3249	0.0	41.1
r3zt2s38	1157	0.0	42.7
r3zt2s32	6.0	0.0	0.0
r3zt2s60	364.0	0.0	39.8
r3zt2s33	3949667	3.0	95.7
r3zt2s25	1681	0.0	38.3
r3zt2s96	6.0	0.0	0.0
r3zt2s68	1569	0.0	36.1
r3zt2s76	1056	0.0	43.2
r3zt2s74	7253513	5.4	95.2
r3zt2s20	938.0	0.0	35.8
r3zt2s92	15255234	11.4	97.1
r3zt2s89	3887	0.0	37.1
r3zt2s51	1336	0.0	35.5
r3zt2s65	5628	0.0	37.3
r3zt2s36	1065	0.0	42.9
r3zt2s88	11.0	0.0	0.0
r3zt2s48	113.0	0.0	0.0
r3zt2s87	387.0	0.0	42.1
r3zt2s50	887.0	0.0	36.1
r3zt2s14	3089	0.0	40.6
r3zt2s64	4.0	0.0	0.0
r3zt2s83	6285214	4.7	96.5
r3zt2s39	365.0	0.0	37.5
r3zt2s67	5225491	3.9	95.8
r3zt2s35	2983	0.0	41.9
r3zt2s18	6735010	5.0	97.1
r3zt2s86	1796	0.0	36.0
r3zt2s16	106.0	0.0	0.9
r3zt2s91	3909	0.0	38.6
r3zt2s21	2280	0.0	42.2
r3zt2s44	701.0	0.0	41.5
r3zt2s43	2517	0.0	40.1
r3zt2s66	3571	0.0	41.7
r3zt2s40	108.0	0.0	0.0
r3zt2s73	4045	0.0	41.6
r3zt2s69	4606	0.0	30.7
r3zt2s22	4849694	3.6	97.0
r3zt2s11	9869290	7.4	96.1
r3zt2s53	4017912	3.0	94.9
r3zt2s4	2022	0.0	38.4
r3zt2s80	137.0	0.0	0.0
r3zt2s72	25.0	0.0	0.0
r3zt2s41	3382	0.0	38.4
r3zt2s61	3358790	2.5	95.3
r3zt2s37	2458	0.0	44.1
r3zt2s57	1524	0.0	38.3
r3zt2s8	22.0	0.0	0.0
r3zt2s54	491.0	0.0	40.9
r3zt2s71	5422088	4.1	95.8
r3zt2s31	326.0	0.0	59.8
r3zt2s9	4738190	3.5	96.4
r3zt2s6	3638	0.0	40.0
r3zt2s3	7652	0.0	40.5
r3zt2s84	1315	0.0	37.4
r3zt2s2	7136	0.0	34.6
r3zt2s27	1926	0.0	39.9
r3zt2s29	1203	0.0	38.4
r3zt2s77	3887	0.0	31.2
r3zt2s23	436.0	0.0	38.8
r3zt2s12	1757	0.0	39.0
r3zt2s28	449.0	0.0	40.8
r3zt2s15	801.0	0.0	41.1
r3zt2s95	523.0	0.0	35.4
r3zt2s78	2297	0.0	41.5
r3zt2s79	616.0	0.0	45.0
r3zt2s90	3114	0.0	39.5
r3zt2s56	4.0	0.0	0.0
r3zt2s1	15630248	11.7	96.5
r3zt2s45	2011	0.0	37.2
r3zt2s75	5644621	4.2	95.0
r3zt2s13	6168	0.0	29.3
r3zt2s81	3737	0.0	33.5
r3zt2s30	6610541	4.9	96.0
r3zt2s46	1269	0.0	42.1
r3zt2s10	3966793	3.0	96.7
r3zt2s42	4883377	3.7	96.0
r3zt2s85	4350708	3.3	96.6
r3zt2s5	3447694	2.6	96.9
r3zt2s49	1397	0.0	29.8
r3zt2s47	3277084	2.5	95.7
r3zt2s26	1144	0.0	41.6
r3zt2s82	2194	0.0	43.2
r3zt2s24	149.0	0.0	0.0
r3zt2s93	3916	0.0	36.9
r3zt2s55	156.0	0.0	30.8
r3zt2s70	4498803	3.4	96.4
r3zt2s34	4157450	3.1	95.7
r3zt2s59	1128	0.0	37.9
r3zt2s62	486.0	0.0	40.5
r3zt2s94	1753	0.0	40.3
r3zt2s63	161.0	0.0	38.5
r3zt2s52	849.0	0.0	23.6

Uncheck the tick box to hide columns. Click and drag the handle on the left to change order.

Sort	Column	Description	ID	Scale
\|\|	Total Read Count	Total Read Count	`Total Read Count`	None
\|\|	Portion (%)	Portion (%)	`Portion (%)`	None
\|\|	Perfect (%)	Perfect (%)	`Perfect (%)`	None

FastQC

FastQC is a quality control tool for high throughput sequence data, written by Simon Andrews at the Babraham Institute in Cambridge.

Sequence Quality Histograms

The mean quality value across each base position in the read. See the FastQC help.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

Per Sequence Quality Scores

The number of reads with average quality scores. Shows if a subset of reads has poor quality. See the FastQC help.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

Per Base Sequence Content

The proportion of each base position for which each of the four normal DNA bases has been called. See the FastQC help.

Click a heatmap row to see a line plot for that dataset.

rollover for sample name

Position: -

%T: -

%C: -

%A: -

%G: -

Per Sequence GC Content

The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content. See the FastQC help.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

Per Base N Content

The percentage of base calls at each position for which an N was called. See the FastQC help.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

Sequence Length Distribution

All samples have sequences of a single length (101bp).

Sequence Duplication Levels

The relative level of duplication found for every sequence. See the FastQC help.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

Overrepresented sequences

The total amount of overrepresented sequences found in each library. See the FastQC help for further information.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

Adapter Content

The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. See the FastQC help. Only samples with ≥ 0.1% adapter contamination are shown.

Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

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Per Sequence GC Content

Per Base N Content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

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rollover for sample name

Per Sequence GC Content

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Sequence Length Distribution

Sequence Duplication Levels

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