FastQCFastQC Report
Mon 14 May 2018
HG5M3BCX2_l01n02_r2zt2wts14.352000000d4e49.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG5M3BCX2_l01n02_r2zt2wts14.352000000d4e49.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length101
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACACAACACACGGGGACGTCGACAAGGGAGGATTCGGATCTACGATTA116.666666666666664No Hit
CATCTGACGCTGCCGACGATTAGAGAGCTGTAGATCACGCCTGACCCCGC116.666666666666664No Hit
CTTGCCCCACCTACTCACCCCATACCCCTGTCGTCGTCTTCTTTCGCGCC116.666666666666664No Hit
ATACTCATCTGGCCCGGCCGACACGACGATGTCTAGCGATTCCCGCTGGG116.666666666666664No Hit
GGACCCTTCCAATCTTGTTTTTTTTTTTTACCTTTTTTTTTCCCCCCAAC116.666666666666664No Hit
CCTCTGTTCTGGTTGCATATGTTTTCAGTTTAAGAGGTAATGATTAATAG116.666666666666664No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)