FastQCFastQC Report
Sun 19 Jun 2022
HG57LDRX2_n02_br85.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n02_br85.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTAGAAGCGGGGGTCCTTGATACACCACGCTGTCTTGAGTGGGCGTGGC15.263157894736842No Hit
GCATGCGACAGCTCCCACGATTGGGTCCGGGGGGTTGGGGACGGTCGGCA15.263157894736842No Hit
CTGCAGGAGGCGTGCTCGGCATGGCCCTGGGCACGGGGATGTGGTTAGGT15.263157894736842No Hit
CCCTACCTCCTGGCAGACACCTAGCTAAGGGCAGTTACAGCTAGGGGACT15.263157894736842No Hit
GACATAGGGAGACAGGGGGCAAATGTTTTTCTAAGTTTGTTATTTATCTT15.263157894736842No Hit
TGCGTAGGGCGCCGCGCGGCGCACCTGAGCCATTGGGGCTAGAGGGGCGG15.263157894736842No Hit
GCCTTACCCTCGCCATAGGAGACCTCACGTTCACCCTCCAAGTCCCCCTT15.263157894736842No Hit
GCCCCGCTCGGGGAACAGGATCCCAGGTAGGCAAAGTATTCAGTTACAGT15.263157894736842No Hit
GGGCGGTGCCCAGCATGGGGGGCCAGGCGAGTGCGCTCCCTCTGCACCGT15.263157894736842No Hit
TTCCTGTTTATCTTTAAGGTTAAGCTGTTCCCAGGAATGTTTTAACTACG15.263157894736842No Hit
GGGGCGAGGGGGGCCGGGCAGGAGGGGGAGCGCTGACCCCGTCTCCGGTT15.263157894736842No Hit
CACCCTGCCTACCTTGCAGGGACGCCAGGAGGACAGAGTGGGAAGGCAAG15.263157894736842No Hit
GGGCTGGACTGGGCGTGAGGCGTCTCTGCTCTCATTTTCCCTTATGGCTG15.263157894736842No Hit
AAGCAGAGGAGATGGAGAGGTTGCTCAGTGGCTAGAGCAATAGCTGCTCT15.263157894736842No Hit
GGGTACTGGTTAGTTCATATTATTGTTCCTCCTATGGGGCAGCAAACTCC15.263157894736842No Hit
ATCCCTGCCTGCGCGGTATCGGTTAGTGTAGGCAGGATTCGTGCCGGACA15.263157894736842No Hit
GAGGGGTAAAGAGATGCCCTGCTTTTAGGAAGTGGGTGAGAACTGCAAGC15.263157894736842No Hit
GACGTGCTCCACCCCCTTTCTCAGGACCTTCTTCTCAGTGTCCAGGTGCA15.263157894736842No Hit
CCAGAAAAGAGAGCCAAAAGGGAGGGAAAAGCAGAGAAAGAGCCCGGGAA15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)