FastQCFastQC Report
Thu 14 Jul 2022
HG57LDRX2_n02_br49a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n02_br49a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12341958
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATT1078700.8740104284911682No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCC983630.7969805115201332No Hit
GTTCAATACATCGGATCGACGCGTAAACGGTACGTCGGCCTGGAGACTAG918590.7442822281521295No Hit
GTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCT861700.6981874350893108No Hit
GTTCAATACATCGGATAGTTCGCGACACCGTTCGTCGGCCTGGAGACTAG708030.5736772074576821No Hit
CTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCG573740.4648695126008369No Hit
GTTCAATACATCGGACGATACGCGTTGGTACGCGTAAGCCTGGAGACTAG538560.4363651213202962No Hit
GGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGC492540.3990776828117548No Hit
GTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAG445150.360680209736575No Hit
GTTCAATACATCGGACCGTACGTCGTGTCGAACGACGGCCTGGAGACTAG441170.3574554377838589No Hit
GTGCTAGAGCTTGCTACGACCAATTGAGCTATTATGCGCGCGATACGCGT375020.3038577833436153No Hit
GTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATC305550.24757011812874424No Hit
GAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTT223020.18070066354139272No Hit
GTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTA188750.15293359449124685No Hit
GCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCGTAGCAAGCTC159980.12962286859183933No Hit
GGATCGACGCGTAAACGGTACGTCGGCCTGGAGACTAGGGAGTAATCCCC147190.11925984515584966No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACCTGTCTCTT133230.10794883599506658No Hit
CGTAAACGGTACGTCGGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTT133030.10778678715322154No Hit
ATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCG130790.10597184012455722No Hit
GTATAGGGTCGAACACATAAGCGATGAACTCGGTGTGAAGCCTGTCTCTT129680.1050724690523173No Hit
GAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGAC128200.10387330762266409No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)