FastQCFastQC Report
Sun 19 Jun 2022
HG57LDRX2_n01_br85.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n01_br85.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACTAAGGAGCTGAAGGAGTTTGCTGCCCCATAGGAGGAACAATAATAT15.263157894736842No Hit
AAGCTAGATAGTGAGATGGGTCCAAAAAGAGGAGGAGGAGGGAAACCAAG15.263157894736842No Hit
CCCCCCACCCGGCAAGAGGCAATTGAATGGAATTAGCCACAACTCATTGA15.263157894736842No Hit
ATTACATTTAGGGCACACAGATTAAAGCCTTTATTGGAAAATTAGCAAAT15.263157894736842No Hit
ATACTGTGTGTGGTTTGTTAAGTAGTCACGCACAAAGAAGAAACAAGAAG15.263157894736842No Hit
GTGGAAAGGAGAGAAAGGGCAGGTGGGGGGTTAGCTGGAGCAGCAGGGGC15.263157894736842No Hit
GCCTGGGGCTGAGAAAAAAGAAAAACAAACCTGGGTATGCCCCTGTAGTG15.263157894736842No Hit
CCGCCACACAGCTCCAGTTCCCCAGACCCCTGAAGGTGCTCCCATCCCCC15.263157894736842No Hit
GCACAACACACTAGGTTCCAGGGGAGAGCATTAATAACACTCTGGACCCT15.263157894736842No Hit
CCTTTCAATGGGGTGTCAAGGTTAAATTCCAGAGCAGGGACAGAAAGGGG15.263157894736842No Hit
AGGCAAAACCCCCTTTCTCCCCAGTCCAGAATCCAAATATGAATGTTTGC15.263157894736842No Hit
CTCCCAGGGTGAGGGGGTGGGAGGAGGAGGAGGTCGGGCCCGCGCGGGCC15.263157894736842No Hit
GAGCTACATGAGACTCTAAATGAGACTTTAAATGAAAATAAGAACATTAT15.263157894736842No Hit
GGGTGCTCCCTTTGGAGAGGGAGCTCACTCTCCATATTGAGAGGTGATTC15.263157894736842No Hit
CTCAACGTGCGTCTCCTTCTCGCGTTCCCCCTAGGCGCCCCACTCCGCAG15.263157894736842No Hit
GACGAACGAGGGGTGGGGCGGAGGGATCCACACCGTCTGTGTGCTTTCGT15.263157894736842No Hit
CCCTTGAGCCCTGTAAATTAGAATAAATGGGAGTAATGAAGTAAGGTATC15.263157894736842No Hit
GAGCAGTTCGCCTCAATGCGGGACCTGTACATCAAGAATGGCCAGGGCTT15.263157894736842No Hit
CTCCTGGGCTCCGGGTCCCCAGCGGCGGGCAATCTCAGCTCCACAACTTC15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)