FastQCFastQC Report
Sun 19 Jun 2022
HG57LDRX2_n01_br80.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n01_br80.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAGAGGGTTGAGGAGCAACAGGCCTTGGAAGCTTCATGTCTTACACAGT14.3478260869565215No Hit
GGCAGACACATCTGTGTTGAGCTCCCCTTTCACCCTCCCATACCTGTCTC14.3478260869565215No Hit
CAGCTATAGGGATGACATCATCATTAGAAAATCCAAGGAATGTCATCATA14.3478260869565215No Hit
AGTGTAAAGTGTAAAGTGTCTAGAGTGTGTAGAAAAACAAGGGAACAATA14.3478260869565215No Hit
AGATGGTGCGGCGCCTCAGGCCCGGCCGGTAACGACGACCGTTACCCCAA14.3478260869565215No Hit
AACTGCAGCACTTACATCATGATCTGTAAACAACTTCGAGACAAACGTAT14.3478260869565215No Hit
GCGCCTAGCCTATTGTGGGTGGTGTCATCCTTGGCTGGTGGTCCTGGGTT14.3478260869565215No Hit
CTCCATGACAATCAGCAGGCACTTCCTCCCGGCATACAGGTTCTCATAGA14.3478260869565215No Hit
CCCCAAGGCTGGCGGCAAGTCAGGGCGACCGACCTTGTACCTGGCTGACT14.3478260869565215No Hit
GTCCTGGGTTTGTGAAATGAGGGGAGGTGTCTAGACTCACATGCTCCTGT14.3478260869565215No Hit
CCACTTATAAAGTCCAAAGTCCTCACTGCCTCAGATGCGCAGGTCTTCTG14.3478260869565215No Hit
CATTGGGGTTTCAATGTTGCCTGAAAGACCAGCAACCCACAGGAAGTTCT14.3478260869565215No Hit
GTCTGGATCTGGACCACTGACCCACTCACAGCCCTCAGCAGGACTTTAAG14.3478260869565215No Hit
ACAGGAGAGAGAAAAGAAAGGGGACTAGGGCGAAGGAGAAGAACGGATAC14.3478260869565215No Hit
CCTCCACACTGTGGGTCTTGGTGAGGCCCATGTTTTGATTTCTCCTTTTC14.3478260869565215No Hit
CCTGAAAACGGCACGGCGGCTGCACGCTCCGGAGGGTGCGGCCCGGGTCC14.3478260869565215No Hit
TCGCACTCAAGCTGACACTGCAACCAAAAAAACCAACCCAAAGACGAATA14.3478260869565215No Hit
GTATAAGGCCAAATTAGACAGCAGTCCCACAGGTAAGTCTAGCATACAAC14.3478260869565215No Hit
CTCATTCATTCACAACGCCGTGTCAGGAAACAACTCTGTAGCACCAACCC14.3478260869565215No Hit
CGGAGCGGCTGTGGCCATTGCCTCGGGCGCTGTTTTCTGAGACCTCGCCT14.3478260869565215No Hit
GCATAAGGGGACTGGAGTGGGAAGGGACATGAGGAGGGGTTGAGGGGCTA14.3478260869565215No Hit
GGTAAGGATACACCCAATTTGATAGGGCCCCACATACTTTGTAAGTAACT14.3478260869565215No Hit
CGTGCTGCCACTATTCCTGCTCCCAGCCTTCTATCCAGACCTAGCTGGGG14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)