FastQCFastQC Report
Sun 19 Jun 2022
HG57LDRX2_n01_br79.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n01_br79.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTGACTAGACTCAGCCAAGGCCTGGCCACCGCTCTGCCCCCAGCCCC19.090909090909092No Hit
GGGCTGTGCGGAGCAGTGAGCGAGCGCTCACACTGGCGCTTCTGCTAATT19.090909090909092No Hit
AGCTTGCTCTGCTCTGTCTTCTATGCTCTGGGGACCTTGTCAGGGAAAAC19.090909090909092No Hit
CAACGAAAGTACTCAGCAATTGGTGAGTTTCAGTCTTCATAGACAGTTCC19.090909090909092No Hit
GGCCAGGGTCAGGGCCGCAGCCGGCTGTGCGCCGTGCCCGCCCGGGGGGC19.090909090909092No Hit
CCCGGAGACCGCGGCGCACTTGGACTTCCCTCTCCATTCGCCAGCCGCCT19.090909090909092No Hit
CCCCTAGGCTATGCGGGCCATCAATGGAAGCTGAGCTGTGTGACATCTGT19.090909090909092No Hit
GCGGCGAGGTCACTGGGACCCTCGGCGCGCGGGGGTGGTGGTGGTGTCGT19.090909090909092No Hit
CCTCCGCCCTCTCCCGCCCCTTCCCAGTACAAAGCAGAGACTGACAGGCA19.090909090909092No Hit
CCCAGAAGGTCGGGATGCCTTGTTTATTGACAATGGCCTGTGTGTCTCTG19.090909090909092No Hit
CCCATACTCCTACCTGAACACTGCCCACACACCACCAGCGCAGGCTCACC19.090909090909092No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)