FastQCFastQC Report
Thu 14 Jul 2022
HG57LDRX2_n01_br49a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n01_br49a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12341958
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATT1001590.811532497517817No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCC998310.8088748965115584No Hit
GTTCAATACATCGGATCGACGCGTAAACGGTACGTCGGCCTGGAGACTAG942630.7637604989419021No Hit
GTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCT804440.6517928516690787No Hit
GTTCAATACATCGGATAGTTCGCGACACCGTTCGTCGGCCTGGAGACTAG749060.6069215273621901No Hit
CTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCG567140.4595219008199509No Hit
GTTCAATACATCGGACGATACGCGTTGGTACGCGTAAGCCTGGAGACTAG546690.44295240674129666No Hit
GGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGC493680.4000013612102715No Hit
GTTCAATACATCGGACCGTACGTCGTGTCGAACGACGGCCTGGAGACTAG450810.36526619196078935No Hit
GTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAG439130.35580253959703967No Hit
GTGCTAGAGCTTGCTACGACCAATTGAGCTATTATGCGCGCGATACGCGT403090.32660133829656524No Hit
GTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATC304060.24636285425699878No Hit
GAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTT211730.17155300641924076No Hit
GTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTA181400.14697829955344202No Hit
GGATCGACGCGTAAACGGTACGTCGGCCTGGAGACTAGGGAGTAATCCCC153830.12463986670510464No Hit
GCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCGTAGCAAGCTC149370.1210261775319605No Hit
CGTAAACGGTACGTCGGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTT129090.10459442496887447No Hit
GTATAGGGTCGAACACATAAGCGATGAACTCGGTGTGAAGCCTGTCTCTT128260.1039219222752176No Hit
GAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGAC127270.10311978050808471No Hit
ATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCG125550.10172616046821743No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACCTGTCTCTT123650.10018669647068965No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)