FastQCFastQC Report
Thu 14 Jul 2022
HG57LDRX2_n01_br47a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG57LDRX2_n01_br47a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21691525
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCAATACATCGGAACGCGAATCGTCGACGCGTATAGCCTGGAGACTAG1027080.4734936801354446No Hit
GTTCAATACATCGGACGCGATATCACTCGACGCGATAGCCTGGAGACTAG919950.4241057279283038No Hit
ACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATT892830.4116031491561796No Hit
CTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCG729140.3361404972679422No Hit
GCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCC706160.3255464979986423No Hit
GTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCT472930.21802524257745823No Hit
CGTATAGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGG373360.17212252250590956No Hit
GTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAG338760.15617159236153288No Hit
GTGCTAGAGCTTGCTACGACCAATTGAGCTATTATGCGCGCGATACGCGT335120.15449351762958113No Hit
GGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATACGC305950.14104586929687976No Hit
GTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTA264530.12195085407780229No Hit
GAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTT237730.10959579835903654No Hit
GTTCATCGCTTATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATC225660.1040314131901745No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)